RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 BVES-AS1Q5T3Y7 98 aa12.51□□□□□ -0.41
UBQLN1-201ENST00000257468 C2orf91Q6ZV80 131 aa12.51□□□□□ -0.41
UBQLN1-201ENST00000257468 CENPEQ02224 2701 aa12.51□□□□□ -0.41
UBQLN1-201ENST00000257468 BRI3O95415 125 aa12.51□□□□□ -0.41
UBQLN1-201ENST00000257468 OR2K2Q8NGT1 345 aa12.51□□□□□ -0.41
UBQLN1-201ENST00000257468 COX11Q9Y6N1 276 aa12.51□□□□□ -0.41
UBQLN1-201ENST00000257468 NRACQ8N912 160 aa12.5□□□□□ -0.41
UBQLN1-201ENST00000257468 LINC00477Q96M19 166 aa12.5□□□□□ -0.41
UBQLN1-201ENST00000257468 IGLV2-18A0A075B6J9 118 aa12.5□□□□□ -0.41
UBQLN1-201ENST00000257468 LINC01546A6NGU7 62 aa12.5□□□□□ -0.41
UBQLN1-201ENST00000257468 OVOL1O14753 267 aa12.5□□□□□ -0.41
UBQLN1-201ENST00000257468 RNASE4P34096 147 aaKnown RBP12.5□□□□□ -0.41
UBQLN1-201ENST00000257468 TMEM158Q8WZ71 300 aa12.5□□□□□ -0.41
UBQLN1-201ENST00000257468 NXT2Q9NPJ8 142 aaKnown RBP12.5□□□□□ -0.41
UBQLN1-201ENST00000257468 ANKRD17O75179 2603 aaKnown RBP12.5□□□□□ -0.41
UBQLN1-201ENST00000257468 A0A0G2JLM5 398 aa12.49□□□□□ -0.41
UBQLN1-201ENST00000257468 M0R381 172 aa12.49□□□□□ -0.41
UBQLN1-201ENST00000257468 FGF6P10767 208 aa12.49□□□□□ -0.41
UBQLN1-201ENST00000257468 FCER1GP30273 86 aa12.49□□□□□ -0.41
UBQLN1-201ENST00000257468 SMIM15Q7Z3B0 74 aa12.49□□□□□ -0.41
UBQLN1-201ENST00000257468 DAZ1Q9NQZ3 744 aaKnown RBP12.49□□□□□ -0.41
UBQLN1-201ENST00000257468 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
UBQLN1-201ENST00000257468 ANXA2RQ3ZCQ2 193 aa12.49□□□□□ -0.41
UBQLN1-201ENST00000257468 WFDC12Q8WWY7 111 aa12.49□□□□□ -0.41
UBQLN1-201ENST00000257468 USP9YO00507 2555 aaPredicted RBP12.48□□□□□ -0.41
UBQLN1-201ENST00000257468 A1L4Q6 167 aa12.48□□□□□ -0.41
UBQLN1-201ENST00000257468 Q8N8P6 123 aa12.48□□□□□ -0.41
UBQLN1-201ENST00000257468 ORAOV1Q8WV07 137 aa12.48□□□□□ -0.41
UBQLN1-201ENST00000257468 BBC3Q96PG8 261 aaPredicted RBP12.48□□□□□ -0.41
UBQLN1-201ENST00000257468 PEF1Q9UBV8 284 aaKnown RBP12.48□□□□□ -0.41
UBQLN1-201ENST00000257468 IGHV4-4A0A075B6R2 117 aa12.48□□□□□ -0.41
UBQLN1-201ENST00000257468 TRAV21A0A0B4J279 112 aa12.48□□□□□ -0.41
UBQLN1-201ENST00000257468 SMPXQ9UHP9 88 aa12.48□□□□□ -0.41
UBQLN1-201ENST00000257468 ZNF462Q96JM2 2506 aa12.47□□□□□ -0.41
UBQLN1-201ENST00000257468 GNRH2O43555 120 aa12.47□□□□□ -0.41
UBQLN1-201ENST00000257468 FAM19A4Q96LR4 140 aa12.47□□□□□ -0.41
UBQLN1-201ENST00000257468 FAM208BQ5VWN6 2430 aa12.46□□□□□ -0.41
UBQLN1-201ENST00000257468 A0A096LNT2 108 aa12.46□□□□□ -0.41
UBQLN1-201ENST00000257468 LINC01356Q8N9X3 169 aa12.46□□□□□ -0.41
UBQLN1-201ENST00000257468 CCL25O15444 150 aa12.46□□□□□ -0.42
UBQLN1-201ENST00000257468 CD5LO43866 347 aa12.46□□□□□ -0.42
UBQLN1-201ENST00000257468 TGFAP01135 160 aa12.46□□□□□ -0.42
UBQLN1-201ENST00000257468 S100A4P26447 101 aaKnown RBP12.46□□□□□ -0.42
UBQLN1-201ENST00000257468 PSMB8P28062 276 aa12.46□□□□□ -0.42
UBQLN1-201ENST00000257468 TAX1BP3O14907 124 aa12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 C12orf54Q6X4T0 127 aa12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 ZNF843Q8N446 348 aa12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 PRSS1P07477 247 aa12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 SLC25A16P16260 332 aa12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 NMUP48645 174 aa12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 DSCR9P59020 149 aa12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 ODF1Q14990 250 aa12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 PCP2Q8IVA1 136 aa12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 C14orf178Q8N769 122 aaPredicted RBP12.45□□□□□ -0.42
UBQLN1-201ENST00000257468 GATA3P23771 443 aa12.44□□□□□ -0.42
UBQLN1-201ENST00000257468 ASIPP42127 132 aa12.44□□□□□ -0.42
UBQLN1-201ENST00000257468 FOXC2Q99958 501 aa12.44□□□□□ -0.42
UBQLN1-201ENST00000257468 SMIM17P0DL12 118 aa12.44□□□□□ -0.42
UBQLN1-201ENST00000257468 OR1N2Q8NGR9 330 aa12.44□□□□□ -0.42
UBQLN1-201ENST00000257468 DPF1Q92782 380 aa12.44□□□□□ -0.42
UBQLN1-201ENST00000257468 PHLDA3Q9Y5J5 127 aa12.44□□□□□ -0.42
UBQLN1-201ENST00000257468 LRRK2Q5S007 2527 aa12.43□□□□□ -0.42
UBQLN1-201ENST00000257468 MXRA5Q9NR99 2828 aa12.43□□□□□ -0.42
UBQLN1-201ENST00000257468 CBY3A6NI87 242 aa12.43□□□□□ -0.42
UBQLN1-201ENST00000257468 PTTG1IPP53801 180 aa12.43□□□□□ -0.42
UBQLN1-201ENST00000257468 BOD1L2Q8IYS8 172 aa12.43□□□□□ -0.42
UBQLN1-201ENST00000257468 DEFB125Q8N687 156 aa12.43□□□□□ -0.42
UBQLN1-201ENST00000257468 DCANP1Q8TF63 244 aa12.43□□□□□ -0.42
UBQLN1-201ENST00000257468 RPL39LQ96EH5 51 aaKnown RBP12.43□□□□□ -0.42
UBQLN1-201ENST00000257468 DOPEY2Q9Y3R5 2298 aa12.43□□□□□ -0.42
UBQLN1-201ENST00000257468 RNF223E7ERA6 249 aa12.42□□□□□ -0.42
UBQLN1-201ENST00000257468 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
UBQLN1-201ENST00000257468 SRSF1Q07955 248 aaKnown RBP eCLIP12.42□□□□□ -0.42
UBQLN1-201ENST00000257468 LAGE3Q14657 143 aa12.42□□□□□ -0.42
UBQLN1-201ENST00000257468 KRTAP10-9P60411 292 aa12.42□□□□□ -0.42
UBQLN1-201ENST00000257468 TTTY13Q9BZ97 58 aa12.42□□□□□ -0.42
UBQLN1-201ENST00000257468 IGKV2D-26A0A0A0MRZ7 120 aa12.41□□□□□ -0.42
UBQLN1-201ENST00000257468 C7orf71A4D174 169 aa12.41□□□□□ -0.42
UBQLN1-201ENST00000257468 MGPP08493 103 aa12.41□□□□□ -0.42
UBQLN1-201ENST00000257468 APRG1Q8IVJ8 170 aa12.41□□□□□ -0.42
UBQLN1-201ENST00000257468 RASL10AQ92737 203 aa12.41□□□□□ -0.42
UBQLN1-201ENST00000257468 PRSS47A8MTI9 375 aa12.41□□□□□ -0.42
UBQLN1-201ENST00000257468 FOSL1P15407 271 aa12.41□□□□□ -0.42
UBQLN1-201ENST00000257468 MRAP2Q96G30 205 aa12.41□□□□□ -0.42
UBQLN1-201ENST00000257468 HHLA3Q9XRX5 114 aa12.41□□□□□ -0.42
UBQLN1-201ENST00000257468 K7EMT4 169 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 ZNF688P0C7X2 276 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 COX6B1P14854 86 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 UBE2V1Q13404 147 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 TMEM97Q5BJF2 176 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 DUX5Q96PT3 197 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 SMIM2Q9BVW6 85 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 ZMAT4Q9H898 229 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 MUC4Q99102 2169 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 UBR5O95071 2799 aaPredicted RBP12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 IGKV3-20P01619 116 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
UBQLN1-201ENST00000257468 VAMP3Q15836 100 aa12.39□□□□□ -0.43
UBQLN1-201ENST00000257468 KLLNB2CW77 178 aa12.39□□□□□ -0.43
UBQLN1-201ENST00000257468 IGKCP01834 107 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms