RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 NDUFA4O00483 81 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 APOHP02749 345 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-202ENST00000414700 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-202ENST00000414700 SLURP1P55000 103 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 KLF5Q13887 457 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-202ENST00000414700 RASL11AQ6T310 242 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 DEFB125Q8N687 156 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 ZNF503Q96F45 646 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 TMEM238C9JI98 176 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 MPV17L2Q567V2 206 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 PRR27Q6MZM9 219 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 RAX2Q96IS3 184 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 FAM167A-AS1Q96KT0 104 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 C19orf24Q9BVV8 132 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 SLC25A2Q9BXI2 301 aa11.84□□□□□ -0.51
SHMT2-202ENST00000414700 ZNF331Q9NQX6 463 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-202ENST00000414700 IGHV3-66A0A0C4DH42 116 aa11.83□□□□□ -0.52
SHMT2-202ENST00000414700 NSUN5P1Q3KNT7 163 aa11.83□□□□□ -0.52
SHMT2-202ENST00000414700 BVES-AS1Q5T3Y7 98 aa11.83□□□□□ -0.52
SHMT2-202ENST00000414700 TMEM190Q8WZ59 177 aa11.83□□□□□ -0.52
SHMT2-202ENST00000414700 NUDT11Q96G61 164 aa11.83□□□□□ -0.52
SHMT2-202ENST00000414700 C2orf70A6NJV1 201 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 H3BRN7 92 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 SYNJ2BPP57105 145 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 SLAQ13239 276 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 TM4SF20Q53R12 229 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 ERASQ7Z444 233 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 GPHB5Q86YW7 130 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 OR1N2Q8NGR9 330 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 SHANK2-AS3Q9BTD1 123 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 MRPL32Q9BYC8 188 aaKnown RBP11.82□□□□□ -0.52
SHMT2-202ENST00000414700 RABAC1Q9UI14 185 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 CIDEAO60543 219 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 PYYP10082 97 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 IBA57Q5T440 356 aaKnown RBP11.82□□□□□ -0.52
SHMT2-202ENST00000414700 SELENOKQ9Y6D0 94 aa11.82□□□□□ -0.52
SHMT2-202ENST00000414700 HSBP1L1C9JCN9 74 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 LINC01619G3V211 115 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 OR7C2O60412 319 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 C8orf88P0DMB2 117 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 CRYBB3P26998 211 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 AMMECR1LQ6DCA0 310 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 TMEM70Q9BUB7 260 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 TMEM167BQ9NRX6 74 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 TECRQ9NZ01 308 aaKnown RBP11.81□□□□□ -0.52
SHMT2-202ENST00000414700 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 RNASEKQ6P5S7 137 aaKnown RBP11.81□□□□□ -0.52
SHMT2-202ENST00000414700 DPF1Q92782 380 aa11.81□□□□□ -0.52
SHMT2-202ENST00000414700 CCL24O00175 119 aa11.8□□□□□ -0.52
SHMT2-202ENST00000414700 BUB3O43684 328 aa11.8□□□□□ -0.52
SHMT2-202ENST00000414700 NUDT3O95989 172 aa11.8□□□□□ -0.52
SHMT2-202ENST00000414700 SPATA12Q7Z6I5 190 aa11.8□□□□□ -0.52
SHMT2-202ENST00000414700 DLX4Q92988 240 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-202ENST00000414700 IGF2BP2-AS1Q96M15 143 aa11.8□□□□□ -0.52
SHMT2-202ENST00000414700 METTL26Q96S19 204 aa11.8□□□□□ -0.52
SHMT2-202ENST00000414700 OR4C46A6NHA9 309 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 IGLV2-8P01709 118 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 FHL3Q13643 280 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 SLC25A34Q6PIV7 304 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 DAZ1Q9NQZ3 744 aaKnown RBP11.79□□□□□ -0.52
SHMT2-202ENST00000414700 MUC21A0A0G2JKD1 596 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 MUC21A0A140T8X8 626 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 TMEM213A2RRL7 107 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 H3BTX0 84 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 GP9P14770 177 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 S100A7P31151 101 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 TAS2R45P59539 299 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 PSG9Q00887 426 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 MUC21Q5SSG8 566 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 FAM162BQ5T6X4 162 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 PET117Q6UWS5 81 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 CITED1Q99966 193 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 U3KQE9 123 aa11.79□□□□□ -0.52
SHMT2-202ENST00000414700 GAGE12BA1L429 117 aa11.78□□□□□ -0.52
SHMT2-202ENST00000414700 CRXO43186 299 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-202ENST00000414700 MGST1P10620 155 aaKnown RBP11.78□□□□□ -0.52
SHMT2-202ENST00000414700 MRPS12O15235 138 aaKnown RBP11.77□□□□□ -0.52
SHMT2-202ENST00000414700 NDUFA11Q86Y39 141 aa11.77□□□□□ -0.52
SHMT2-202ENST00000414700 FXYD5Q96DB9 178 aa11.77□□□□□ -0.52
SHMT2-202ENST00000414700 PAXXQ9BUH6 204 aa11.77□□□□□ -0.52
SHMT2-202ENST00000414700 NOTCH3Q9UM47 2321 aa11.77□□□□□ -0.52
SHMT2-202ENST00000414700 LGALS9O00182 355 aa11.77□□□□□ -0.53
SHMT2-202ENST00000414700 UBE2L3P68036 154 aaKnown RBP11.77□□□□□ -0.53
SHMT2-202ENST00000414700 C17orf77Q96MU5 243 aa11.77□□□□□ -0.53
SHMT2-202ENST00000414700 CLEC5AQ9NY25 188 aa11.77□□□□□ -0.53
SHMT2-202ENST00000414700 TP73-AS1Q9UF72 201 aa11.77□□□□□ -0.53
SHMT2-202ENST00000414700 NBEAP1P0C6P0 100 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 GDF5OSQ5U4N7 250 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 RPH3ALQ9UNE2 315 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 SMAD5-AS1Q9Y6J3 95 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 IGHV7-4-1A0A0J9YVY3 117 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 GGTLC3B5MD39 225 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 ADAMTSL5Q6ZMM2 481 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 FAM231DQ6ZW35 169 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 BPIFA4PQ86YQ2 179 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 BLNKQ8WV28 456 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 GRAMD2BQ96HH9 432 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 RHPN1-AS1Q9BWJ2 59 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms