RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 WFDC3Q8IUB2 231 aa9.33□□□□□ -0.92
PNKP-217ENST00000625216 SLC50A1Q9BRV3 221 aa9.33□□□□□ -0.92
PNKP-217ENST00000625216 NRN1Q9NPD7 142 aa9.33□□□□□ -0.92
PNKP-217ENST00000625216 RYR2Q92736 4967 aa9.33□□□□□ -0.92
PNKP-217ENST00000625216 STARD9Q9P2P6 4700 aa9.33□□□□□ -0.92
PNKP-217ENST00000625216 TCRAP04437 139 aa9.32□□□□□ -0.92
PNKP-217ENST00000625216 AKR1C3P42330 323 aa9.32□□□□□ -0.92
PNKP-217ENST00000625216 MEOX2P50222 304 aa9.32□□□□□ -0.92
PNKP-217ENST00000625216 PSG9Q00887 426 aa9.32□□□□□ -0.92
PNKP-217ENST00000625216 RNF182Q8N6D2 247 aa9.32□□□□□ -0.92
PNKP-217ENST00000625216 TCEAL7Q9BRU2 100 aa9.32□□□□□ -0.92
PNKP-217ENST00000625216 EPDR1Q9UM22 224 aa9.32□□□□□ -0.92
PNKP-217ENST00000625216 TRBV20OR9-2A0A075B6H5 130 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 DNASE2O00115 360 aaPredicted RBP9.31□□□□□ -0.92
PNKP-217ENST00000625216 SPRY2O43597 315 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 APOC3P02656 99 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 DCANP1Q8TF63 244 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 C20orf173Q96LM9 149 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 LINC00479Q96M42 142 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 SMIM7Q9BQ49 75 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 ATG101Q9BSB4 218 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 AAMDCQ9H7C9 122 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 MAP6D1Q9H9H5 199 aa9.31□□□□□ -0.92
PNKP-217ENST00000625216 TRAV34A0A0B4J273 112 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 LCE6AA0A183 80 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 ZNF727A8MUV8 499 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 RPL35P42766 123 aaKnown RBP9.3□□□□□ -0.92
PNKP-217ENST00000625216 TFPI2P48307 235 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 RPL11P62913 178 aaKnown RBP9.3□□□□□ -0.92
PNKP-217ENST00000625216 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 GBGT1Q8N5D6 347 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 FAM24BQ8N5W8 94 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 CMTM2Q8TAZ6 248 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 HIST1H2BAQ96A08 127 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 RNF183Q96D59 192 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 C16orf92Q96LL3 132 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 CSTL1Q9H114 145 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 MS4A6AQ9H2W1 248 aa9.3□□□□□ -0.92
PNKP-217ENST00000625216 DNAH1Q9P2D7 4330 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 TENM2Q9NT68 2774 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 CSMD3Q7Z407 3707 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 IGKV2-40A0A087WW87 121 aaPredicted RBP9.29□□□□□ -0.92
PNKP-217ENST00000625216 ZNF705FA8MVS1 300 aaPredicted RBP9.29□□□□□ -0.92
PNKP-217ENST00000625216 DIRC3C9JPN6 131 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 PRAC2D3DTV9 90 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 K7EQG2 157 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 ISLRO14498 428 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 IGKV2D-40P01614 121 aaPredicted RBP9.29□□□□□ -0.92
PNKP-217ENST00000625216 CNN1P51911 297 aaKnown RBP9.29□□□□□ -0.92
PNKP-217ENST00000625216 APRG1Q8IVJ8 170 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 MRPL53Q96EL3 112 aaKnown RBP9.29□□□□□ -0.92
PNKP-217ENST00000625216 IGF2BP2-AS1Q96M15 143 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 PRELID1Q9Y255 219 aa9.29□□□□□ -0.92
PNKP-217ENST00000625216 PLECQ15149 4684 aaKnown RBP9.29□□□□□ -0.92
PNKP-217ENST00000625216 TRAV8-1A0A0A6YYK1 113 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 PGPEP1LA6NFU8 196 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 C9JCJ5 164 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 IGLV2-11P01706 119 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 RPL35AP18077 110 aaKnown RBP9.28□□□□□ -0.92
PNKP-217ENST00000625216 PSG3Q16557 428 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 TMEM183BQ1AE95 376 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 DEFB135Q30KP9 77 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 FAM74A3Q4VXF1 159 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 CENPWQ5EE01 88 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 ATRAIDQ6UW56 229 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 Q86TA4 180 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 ARL6IP6Q8N6S5 226 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 SGK494Q96LW2 274 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 NIPSNAP3BQ9BS92 247 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 SDF2L1Q9HCN8 221 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 NAT8Q9UHE5 227 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 KLF12Q9Y4X4 402 aa9.28□□□□□ -0.92
PNKP-217ENST00000625216 CSN1S1P47710 185 aa9.27□□□□□ -0.93
PNKP-217ENST00000625216 TAS2R60P59551 318 aa9.27□□□□□ -0.93
PNKP-217ENST00000625216 DEFB1P60022 68 aa9.27□□□□□ -0.93
PNKP-217ENST00000625216 RPL23P62829 140 aaKnown RBP9.27□□□□□ -0.93
PNKP-217ENST00000625216 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
PNKP-217ENST00000625216 CLRN3Q8NCR9 226 aa9.27□□□□□ -0.93
PNKP-217ENST00000625216 ZNF738Q8NE65 137 aa9.27□□□□□ -0.93
PNKP-217ENST00000625216 IGLV2-8P01709 118 aa9.26□□□□□ -0.93
PNKP-217ENST00000625216 ZNF688P0C7X2 276 aa9.26□□□□□ -0.93
PNKP-217ENST00000625216 DEFB131AP59861 70 aa9.26□□□□□ -0.93
PNKP-217ENST00000625216 UBE2G1P62253 170 aa9.26□□□□□ -0.93
PNKP-217ENST00000625216 TMEM241Q24JQ0 296 aa9.26□□□□□ -0.93
PNKP-217ENST00000625216 SVBPQ8N300 66 aa9.26□□□□□ -0.93
PNKP-217ENST00000625216 TVP23CQ96ET8 276 aa9.26□□□□□ -0.93
PNKP-217ENST00000625216 FMC1Q96HJ9 113 aa9.26□□□□□ -0.93
PNKP-217ENST00000625216 CLEC5AQ9NY25 188 aa9.26□□□□□ -0.93
PNKP-217ENST00000625216 A0A0J9YWU9 116 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 TRBV6-1A0A0K0K1D8 114 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 SERTM2A0A1B0GWG4 89 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 K7EN84 100 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 GNG4P50150 75 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 FLI1Q01543 452 aaPredicted RBP9.25□□□□□ -0.93
PNKP-217ENST00000625216 ERCC8Q13216 396 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 ADIRFQ15847 76 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 ZNF124Q15973 351 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 SAMD13Q5VXD3 122 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 LINC01551Q86U37 167 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 NHLRC2Q8NBF2 726 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms