RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 C20orf173Q96LM9 149 aa10.92□□□□□ -0.66
ZEB1-218ENST00000560196 CITED2Q99967 270 aaPredicted RBP10.92□□□□□ -0.66
ZEB1-218ENST00000560196 NDFIP1Q9BT67 221 aa10.92□□□□□ -0.66
ZEB1-218ENST00000560196 SRD5A3Q9H8P0 318 aa10.92□□□□□ -0.66
ZEB1-218ENST00000560196 LENEPQ9Y5L5 61 aa10.92□□□□□ -0.66
ZEB1-218ENST00000560196 TRAV2A0A0B4J234 112 aa10.91□□□□□ -0.66
ZEB1-218ENST00000560196 A0A1W2PPQ1 181 aa10.91□□□□□ -0.66
ZEB1-218ENST00000560196 C1orf196B1AJZ1 125 aa10.91□□□□□ -0.66
ZEB1-218ENST00000560196 CCL24O00175 119 aa10.91□□□□□ -0.66
ZEB1-218ENST00000560196 P01737 135 aa10.91□□□□□ -0.66
ZEB1-218ENST00000560196 RPS10P46783 165 aaKnown RBP10.91□□□□□ -0.66
ZEB1-218ENST00000560196 FAM3BP58499 235 aaPredicted RBP10.91□□□□□ -0.66
ZEB1-218ENST00000560196 ZNF738Q8NE65 137 aa10.91□□□□□ -0.66
ZEB1-218ENST00000560196 TSKUQ8WUA8 353 aa10.91□□□□□ -0.66
ZEB1-218ENST00000560196 DLX4Q92988 240 aaPredicted RBP10.91□□□□□ -0.66
ZEB1-218ENST00000560196 AGPAT4-IT1Q9H0P7 198 aa10.91□□□□□ -0.66
ZEB1-218ENST00000560196 RPP21Q9H633 154 aaKnown RBP10.91□□□□□ -0.66
ZEB1-218ENST00000560196 FAM231BA6NCW3 169 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 A8MWL6 223 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 K7EQG2 157 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 CSN3P07498 182 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 CT45A10P0DMU9 189 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 ZNF138P52744 262 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 RPL19P84098 196 aaKnown RBP10.9□□□□□ -0.66
ZEB1-218ENST00000560196 TMEM78Q5T7P6 136 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 LINC00477Q96M19 166 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 C8orf49Q96NF6 230 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 MS4A6AQ9H2W1 248 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 SIGLEC8Q9NYZ4 499 aa10.9□□□□□ -0.66
ZEB1-218ENST00000560196 TRBV7-9A0A0J9YWB2 115 aa10.89□□□□□ -0.67
ZEB1-218ENST00000560196 RAB5BP61020 215 aa10.89□□□□□ -0.67
ZEB1-218ENST00000560196 PAFAH1B2P68402 229 aa10.89□□□□□ -0.67
ZEB1-218ENST00000560196 ERCC8Q13216 396 aa10.89□□□□□ -0.67
ZEB1-218ENST00000560196 SMUG1Q53HV7 270 aa10.89□□□□□ -0.67
ZEB1-218ENST00000560196 OR10J6PQ8NGY7 276 aa10.89□□□□□ -0.67
ZEB1-218ENST00000560196 GFRA4Q9GZZ7 299 aa10.89□□□□□ -0.67
ZEB1-218ENST00000560196 IZUMO1RA6ND01 250 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 ADARB2-AS1A8MUL3 147 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 CRIP1P50238 77 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 SRSF2Q01130 221 aaKnown RBP10.88□□□□□ -0.67
ZEB1-218ENST00000560196 COX19Q49B96 90 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 FAM162BQ5T6X4 162 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 NDUFA11Q86Y39 141 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 C11orf44Q8N8P7 122 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 Q8TAT8 98 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 DUX3Q96PT4 197 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 GPR61Q9BZJ8 451 aa10.88□□□□□ -0.67
ZEB1-218ENST00000560196 FN1P02751 2386 aaKnown RBP10.88□□□□□ -0.67
ZEB1-218ENST00000560196 IGKV3-7A0A075B6H7 116 aa10.87□□□□□ -0.67
ZEB1-218ENST00000560196 A0A1W2PRX2 142 aa10.87□□□□□ -0.67
ZEB1-218ENST00000560196 FOXA3P55318 350 aaPredicted RBP10.87□□□□□ -0.67
ZEB1-218ENST00000560196 SNRPD3P62318 126 aaKnown RBP10.87□□□□□ -0.67
ZEB1-218ENST00000560196 OR8A1Q8NGG7 326 aa10.87□□□□□ -0.67
ZEB1-218ENST00000560196 ASCL2Q99929 193 aa10.87□□□□□ -0.67
ZEB1-218ENST00000560196 NAT8BQ9UHF3 227 aa10.87□□□□□ -0.67
ZEB1-218ENST00000560196 HIVEP1P15822 2718 aa10.86□□□□□ -0.67
ZEB1-218ENST00000560196 TRAV25A0A0B4J276 109 aa10.86□□□□□ -0.67
ZEB1-218ENST00000560196 PHOX2AO14813 284 aa10.86□□□□□ -0.67
ZEB1-218ENST00000560196 SH2D1AO60880 128 aa10.86□□□□□ -0.67
ZEB1-218ENST00000560196 PRB4P10163 310 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-218ENST00000560196 RASL11AQ6T310 242 aa10.86□□□□□ -0.67
ZEB1-218ENST00000560196 OR2D3Q8NGH3 330 aa10.86□□□□□ -0.67
ZEB1-218ENST00000560196 SAV1Q9H4B6 383 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-218ENST00000560196 FABP5P3A8MUU1 101 aa10.85□□□□□ -0.67
ZEB1-218ENST00000560196 CA1P00915 261 aaPredicted RBP10.85□□□□□ -0.67
ZEB1-218ENST00000560196 TRGC2P03986 189 aa10.85□□□□□ -0.67
ZEB1-218ENST00000560196 RPS20P60866 119 aaKnown RBP10.85□□□□□ -0.67
ZEB1-218ENST00000560196 HIST1H1AQ02539 215 aaPredicted RBP10.85□□□□□ -0.67
ZEB1-218ENST00000560196 DEFB114Q30KQ6 69 aa10.85□□□□□ -0.67
ZEB1-218ENST00000560196 WFDC3Q8IUB2 231 aa10.85□□□□□ -0.67
ZEB1-218ENST00000560196 DYNLRB2Q8TF09 96 aa10.85□□□□□ -0.67
ZEB1-218ENST00000560196 FAM19A4Q96LR4 140 aa10.85□□□□□ -0.67
ZEB1-218ENST00000560196 NEU1Q99519 415 aa10.85□□□□□ -0.67
ZEB1-218ENST00000560196 XKRY2A2RUG3 117 aa10.84□□□□□ -0.67
ZEB1-218ENST00000560196 ZNF80P51504 273 aaPredicted RBP10.84□□□□□ -0.67
ZEB1-218ENST00000560196 TCL1AP56279 114 aa10.84□□□□□ -0.67
ZEB1-218ENST00000560196 KRTAP10-3P60369 221 aa10.84□□□□□ -0.67
ZEB1-218ENST00000560196 HIST2H2BDQ6DRA6 164 aa10.84□□□□□ -0.67
ZEB1-218ENST00000560196 ATP5L2Q7Z4Y8 100 aa10.84□□□□□ -0.67
ZEB1-218ENST00000560196 NUP35Q8NFH5 326 aa10.84□□□□□ -0.67
ZEB1-218ENST00000560196 ODF3Q96PU9 254 aa10.84□□□□□ -0.67
ZEB1-218ENST00000560196 TMEM189A5PLL7 270 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 HIGD1CA8MV81 97 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 CRISP2P16562 243 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 LINC01559Q495D7 138 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 ACTL10Q5JWF8 245 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 Q6AWC8 147 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 WDR73Q6P4I2 378 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 RBPMS2Q6ZRY4 209 aaKnown RBP10.83□□□□□ -0.68
ZEB1-218ENST00000560196 APRG1Q8IVJ8 170 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 GTSF1Q8WW33 167 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 GNB1LQ9BYB4 327 aa10.83□□□□□ -0.68
ZEB1-218ENST00000560196 NSD1Q96L73 2696 aaPredicted RBP10.83□□□□□ -0.68
ZEB1-218ENST00000560196 A0A0J9YX75 114 aa10.82□□□□□ -0.68
ZEB1-218ENST00000560196 MT-ND6P03923 174 aa10.82□□□□□ -0.68
ZEB1-218ENST00000560196 ZNF688P0C7X2 276 aa10.82□□□□□ -0.68
ZEB1-218ENST00000560196 TFPI2P48307 235 aa10.82□□□□□ -0.68
ZEB1-218ENST00000560196 PSMG4Q5JS54 123 aa10.82□□□□□ -0.68
ZEB1-218ENST00000560196 TMEM61Q8N0U2 210 aa10.82□□□□□ -0.68
ZEB1-218ENST00000560196 ZFP82Q8N141 532 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms