RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 STOML3Q8TAV4 291 aa13.64□□□□□ -0.23
CHMP7-204ENST00000519414 PAXXQ9BUH6 204 aa13.64□□□□□ -0.23
CHMP7-204ENST00000519414 OR51M1Q9H341 326 aa13.64□□□□□ -0.23
CHMP7-204ENST00000519414 MUC4Q99102 2169 aa13.64□□□□□ -0.23
CHMP7-204ENST00000519414 TRAV8-2A0A0B4J237 113 aa13.63□□□□□ -0.23
CHMP7-204ENST00000519414 A0A0J9YX75 114 aa13.63□□□□□ -0.23
CHMP7-204ENST00000519414 ZNF253O75346 499 aa13.63□□□□□ -0.23
CHMP7-204ENST00000519414 FAM3BP58499 235 aaPredicted RBP13.63□□□□□ -0.23
CHMP7-204ENST00000519414 DAD1P61803 113 aa13.63□□□□□ -0.23
CHMP7-204ENST00000519414 AKR1C8PQ5T2L2 129 aa13.63□□□□□ -0.23
CHMP7-204ENST00000519414 BAP18Q8IXM2 172 aa13.63□□□□□ -0.23
CHMP7-204ENST00000519414 KRTAP4-5Q9BYR2 181 aa13.63□□□□□ -0.23
CHMP7-204ENST00000519414 ZNF331Q9NQX6 463 aaPredicted RBP13.63□□□□□ -0.23
CHMP7-204ENST00000519414 RPRMQ9NS64 109 aa13.63□□□□□ -0.23
CHMP7-204ENST00000519414 ZNF586Q9NXT0 402 aa13.63□□□□□ -0.23
CHMP7-204ENST00000519414 TRBV19A0A075B6N1 114 aa13.62□□□□□ -0.23
CHMP7-204ENST00000519414 F6UB75 175 aa13.62□□□□□ -0.23
CHMP7-204ENST00000519414 SLC17A3O00476 420 aa13.62□□□□□ -0.23
CHMP7-204ENST00000519414 SNRPCP09234 159 aaKnown RBP13.62□□□□□ -0.23
CHMP7-204ENST00000519414 SEC11BP0C7V7 166 aa13.62□□□□□ -0.23
CHMP7-204ENST00000519414 UBE2L3P68036 154 aaKnown RBP13.62□□□□□ -0.23
CHMP7-204ENST00000519414 PQLC2Q6ZP29 291 aa13.62□□□□□ -0.23
CHMP7-204ENST00000519414 SAT2Q96F10 170 aaPredicted RBP13.62□□□□□ -0.23
CHMP7-204ENST00000519414 C20orf173Q96LM9 149 aa13.62□□□□□ -0.23
CHMP7-204ENST00000519414 ACTR3CQ9C0K3 210 aaPredicted RBP13.62□□□□□ -0.23
CHMP7-204ENST00000519414 H3BTX0 84 aa13.61□□□□□ -0.23
CHMP7-204ENST00000519414 RNF182Q8N6D2 247 aa13.61□□□□□ -0.23
CHMP7-204ENST00000519414 C15orf53Q8NAA6 179 aa13.61□□□□□ -0.23
CHMP7-204ENST00000519414 RNF141Q8WVD5 230 aa13.61□□□□□ -0.23
CHMP7-204ENST00000519414 RAB24Q969Q5 203 aa13.61□□□□□ -0.23
CHMP7-204ENST00000519414 FXYD5Q96DB9 178 aa13.61□□□□□ -0.23
CHMP7-204ENST00000519414 ZNF503Q96F45 646 aa13.61□□□□□ -0.23
CHMP7-204ENST00000519414 OR10J4P0C629 311 aa13.6□□□□□ -0.23
CHMP7-204ENST00000519414 STAG3L2P0CL84 134 aa13.6□□□□□ -0.23
CHMP7-204ENST00000519414 STAG3L3P0CL85 134 aa13.6□□□□□ -0.23
CHMP7-204ENST00000519414 IGFL4Q6B9Z1 124 aa13.6□□□□□ -0.23
CHMP7-204ENST00000519414 SLC51BQ86UW2 128 aa13.6□□□□□ -0.23
CHMP7-204ENST00000519414 IGF2BP2-AS1Q96M15 143 aa13.6□□□□□ -0.23
CHMP7-204ENST00000519414 TMEM208Q9BTX3 173 aa13.6□□□□□ -0.23
CHMP7-204ENST00000519414 CTXND1A0A1B0GTU2 59 aa13.59□□□□□ -0.23
CHMP7-204ENST00000519414 A8MTW9 85 aa13.59□□□□□ -0.23
CHMP7-204ENST00000519414 UMAD1C9J7I0 102 aa13.59□□□□□ -0.23
CHMP7-204ENST00000519414 EIF3GO75821 320 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHMP7-204ENST00000519414 NBEAP1P0C6P0 100 aa13.59□□□□□ -0.23
CHMP7-204ENST00000519414 PSG3Q16557 428 aa13.59□□□□□ -0.23
CHMP7-204ENST00000519414 ZNF738Q8NE65 137 aa13.59□□□□□ -0.23
CHMP7-204ENST00000519414 BLNKQ8WV28 456 aa13.59□□□□□ -0.23
CHMP7-204ENST00000519414 HMGB3O15347 200 aaKnown RBP13.58□□□□□ -0.24
CHMP7-204ENST00000519414 NDUFB4O95168 129 aa13.58□□□□□ -0.24
CHMP7-204ENST00000519414 ARL14EPLP0DKL9 152 aa13.58□□□□□ -0.24
CHMP7-204ENST00000519414 EIF5AL1Q6IS14 154 aaKnown RBP13.58□□□□□ -0.24
CHMP7-204ENST00000519414 AMTNQ6UX39 209 aa13.58□□□□□ -0.24
CHMP7-204ENST00000519414 ATG101Q9BSB4 218 aa13.58□□□□□ -0.24
CHMP7-204ENST00000519414 LYRM9A8MSI8 78 aa13.57□□□□□ -0.24
CHMP7-204ENST00000519414 NKX2-5P52952 324 aaPredicted RBP13.57□□□□□ -0.24
CHMP7-204ENST00000519414 TMED6Q8WW62 240 aa13.57□□□□□ -0.24
CHMP7-204ENST00000519414 MRPL53Q96EL3 112 aaKnown RBP13.57□□□□□ -0.24
CHMP7-204ENST00000519414 AAMDCQ9H7C9 122 aa13.57□□□□□ -0.24
CHMP7-204ENST00000519414 CDK2AP2O75956 126 aa13.56□□□□□ -0.24
CHMP7-204ENST00000519414 CXorf1O96002 111 aa13.56□□□□□ -0.24
CHMP7-204ENST00000519414 TNP2Q05952 138 aa13.56□□□□□ -0.24
CHMP7-204ENST00000519414 ZNF726P1Q15940 193 aa13.56□□□□□ -0.24
CHMP7-204ENST00000519414 DPPA3Q6W0C5 159 aa13.56□□□□□ -0.24
CHMP7-204ENST00000519414 SSX7Q7RTT5 188 aa13.56□□□□□ -0.24
CHMP7-204ENST00000519414 RPUSD4Q96CM3 377 aaKnown RBP13.56□□□□□ -0.24
CHMP7-204ENST00000519414 PHYHIPLQ96FC7 376 aa13.56□□□□□ -0.24
CHMP7-204ENST00000519414 PRELID1Q9Y255 219 aa13.56□□□□□ -0.24
CHMP7-204ENST00000519414 C16orf90A8MZG2 172 aa13.55□□□□□ -0.24
CHMP7-204ENST00000519414 GCHFRP30047 84 aa13.55□□□□□ -0.24
CHMP7-204ENST00000519414 LYPD1Q8N2G4 141 aa13.55□□□□□ -0.24
CHMP7-204ENST00000519414 TMEM167BQ9NRX6 74 aa13.55□□□□□ -0.24
CHMP7-204ENST00000519414 NBDYA0A0U1RRE5 68 aa13.54□□□□□ -0.24
CHMP7-204ENST00000519414 ZNF705GA8MUZ8 300 aaPredicted RBP13.54□□□□□ -0.24
CHMP7-204ENST00000519414 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
CHMP7-204ENST00000519414 INSP01308 110 aa13.54□□□□□ -0.24
CHMP7-204ENST00000519414 OR8A1Q8NGG7 326 aa13.54□□□□□ -0.24
CHMP7-204ENST00000519414 NACAE9PAV3 2078 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 MAP1LC3B2A6NCE7 125 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 CRXO43186 299 aaPredicted RBP13.53□□□□□ -0.24
CHMP7-204ENST00000519414 DEFB130BP0DP73 79 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 DEFB130AP0DP74 79 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 TSPOP30536 169 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 RAB5CP51148 216 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 CNN1P51911 297 aaKnown RBP13.53□□□□□ -0.24
CHMP7-204ENST00000519414 ICAM4Q14773 271 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 SPINK13Q1W4C9 94 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 EXOC3-AS1Q8N2X6 119 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 C6orf223Q8N319 242 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 ZNRF2Q8NHG8 242 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 FAM213BQ8TBF2 198 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 SUN5Q8TC36 379 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 MAP1LC3BQ9GZQ8 125 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 Q9H3A6 140 aa13.53□□□□□ -0.24
CHMP7-204ENST00000519414 M0R2Z0 102 aa13.52□□□□□ -0.25
CHMP7-204ENST00000519414 M0R3E3 92 aa13.52□□□□□ -0.25
CHMP7-204ENST00000519414 PRM2P04554 102 aa13.52□□□□□ -0.25
CHMP7-204ENST00000519414 FHITP49789 147 aa13.52□□□□□ -0.25
CHMP7-204ENST00000519414 RANP62826 216 aaKnown RBP13.52□□□□□ -0.25
CHMP7-204ENST00000519414 HIST1H1AQ02539 215 aaPredicted RBP13.52□□□□□ -0.25
CHMP7-204ENST00000519414 OTORQ9NRC9 128 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms