RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 IGF2BP2-AS1Q96M15 143 aa11.96□□□□□ -0.49
CDT1-202ENST00000562747 OR51M1Q9H341 326 aa11.96□□□□□ -0.49
CDT1-202ENST00000562747 GOLT1BQ9Y3E0 138 aa11.96□□□□□ -0.49
CDT1-202ENST00000562747 RNF222A6NCQ9 220 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 SMIM9A6NGZ8 99 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 BOLA2-SMG1P6H3BVE0 249 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 DEFB4AO15263 64 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 NDUFB4O95168 129 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 M6PRP20645 277 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 TAS2R45P59539 299 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 ACOT6Q3I5F7 207 aaPredicted RBP11.95□□□□□ -0.5
CDT1-202ENST00000562747 OR10J6PQ8NGY7 276 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 C11orf45Q8TAV5 145 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 PAXXQ9BUH6 204 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 PPP1R14DQ9NXH3 145 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 PRELID1Q9Y255 219 aa11.95□□□□□ -0.5
CDT1-202ENST00000562747 NUPR2A6NF83 97 aa11.94□□□□□ -0.5
CDT1-202ENST00000562747 G3V3Q6 166 aa11.94□□□□□ -0.5
CDT1-202ENST00000562747 NBEAP1P0C6P0 100 aa11.94□□□□□ -0.5
CDT1-202ENST00000562747 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
CDT1-202ENST00000562747 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
CDT1-202ENST00000562747 BLNKQ8WV28 456 aa11.94□□□□□ -0.5
CDT1-202ENST00000562747 PSMG3Q9BT73 122 aaPredicted RBP11.94□□□□□ -0.5
CDT1-202ENST00000562747 IGHV3OR16-12A0A075B7B8 117 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 PRAC2D3DTV9 90 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 M0R2Z0 102 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 CRXO43186 299 aaPredicted RBP11.93□□□□□ -0.5
CDT1-202ENST00000562747 OR7C2O60412 319 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 INSP01308 110 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 CEMP1Q6PRD7 247 aaPredicted RBP11.93□□□□□ -0.5
CDT1-202ENST00000562747 C1orf158Q8N1D5 194 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 HSD17B11Q8NBQ5 300 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 OR2G3Q8NGZ4 309 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 RNF141Q8WVD5 230 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 FXYD5Q96DB9 178 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 AAMDCQ9H7C9 122 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 RFNGQ9Y644 331 aa11.93□□□□□ -0.5
CDT1-202ENST00000562747 A0A1W2PPV4 95 aa11.92□□□□□ -0.5
CDT1-202ENST00000562747 TMEM189A5PLL7 270 aa11.92□□□□□ -0.5
CDT1-202ENST00000562747 OR10J4P0C629 311 aa11.92□□□□□ -0.5
CDT1-202ENST00000562747 ATP6V0CP27449 155 aa11.92□□□□□ -0.5
CDT1-202ENST00000562747 SERF2P84101 59 aa11.92□□□□□ -0.5
CDT1-202ENST00000562747 ZNF503Q96F45 646 aa11.92□□□□□ -0.5
CDT1-202ENST00000562747 PCLOQ9Y6V0 5065 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 BORCS7-ASMTA0A0B4J1R7 106 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 M0R3E3 92 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 HBE1P02100 147 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 PRB4P10163 310 aaPredicted RBP11.91□□□□□ -0.5
CDT1-202ENST00000562747 CDKN1BP46527 198 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 NANOS2P60321 138 aaKnown RBP11.91□□□□□ -0.5
CDT1-202ENST00000562747 EXOC3-AS1Q8N2X6 119 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 OR10G4Q8NGN3 311 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 OR10G9Q8NGN4 311 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 OR10G7Q8NGN6 311 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 TMEM208Q9BTX3 173 aa11.91□□□□□ -0.5
CDT1-202ENST00000562747 NPIPB6E9PJ23 425 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 TAAR5O14804 337 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 ARPC5O15511 151 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 MBP02144 154 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 TSPOP30536 169 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 RAB2AP61019 212 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 UBE2L3P68036 154 aaKnown RBP11.9□□□□□ -0.5
CDT1-202ENST00000562747 ICAM4Q14773 271 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 BAP18Q8IXM2 172 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 LYPD1Q8N2G4 141 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 PHLDA1Q8WV24 401 aaPredicted RBP11.9□□□□□ -0.5
CDT1-202ENST00000562747 GNPNAT1Q96EK6 184 aaPredicted RBP11.9□□□□□ -0.5
CDT1-202ENST00000562747 ODF3Q96PU9 254 aa11.9□□□□□ -0.5
CDT1-202ENST00000562747 KLK5Q9Y337 293 aaPredicted RBP11.9□□□□□ -0.5
CDT1-202ENST00000562747 TRAV12-2A0A075B6T6 113 aa11.89□□□□□ -0.51
CDT1-202ENST00000562747 RRN3P1Q2M238 152 aa11.89□□□□□ -0.51
CDT1-202ENST00000562747 RPL7L1Q6DKI1 246 aaKnown RBP11.89□□□□□ -0.51
CDT1-202ENST00000562747 FAM122CQ6P4D5 195 aa11.89□□□□□ -0.51
CDT1-202ENST00000562747 TMEM256Q8N2U0 113 aa11.89□□□□□ -0.51
CDT1-202ENST00000562747 PHYHIPLQ96FC7 376 aa11.89□□□□□ -0.51
CDT1-202ENST00000562747 SMLR1H3BR10 107 aa11.88□□□□□ -0.51
CDT1-202ENST00000562747 CDC34P49427 236 aaPredicted RBP11.88□□□□□ -0.51
CDT1-202ENST00000562747 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
CDT1-202ENST00000562747 C20orf144Q9BQM9 153 aa11.88□□□□□ -0.51
CDT1-202ENST00000562747 TEX48A0A1B0GUV7 120 aa11.87□□□□□ -0.51
CDT1-202ENST00000562747 C11orf94C9JXX5 98 aa11.87□□□□□ -0.51
CDT1-202ENST00000562747 CT45A10P0DMU9 189 aa11.87□□□□□ -0.51
CDT1-202ENST00000562747 LEPP41159 167 aa11.87□□□□□ -0.51
CDT1-202ENST00000562747 RANP62826 216 aaKnown RBP11.87□□□□□ -0.51
CDT1-202ENST00000562747 SH3BGRL3Q9H299 93 aa11.87□□□□□ -0.51
CDT1-202ENST00000562747 Q9H3A6 140 aa11.87□□□□□ -0.51
CDT1-202ENST00000562747 CELA1Q9UNI1 258 aa11.87□□□□□ -0.51
CDT1-202ENST00000562747 LOC102723971A0A1B0GUV8 181 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 HMSDA8MTL9 139 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 EIF3GO75821 320 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDT1-202ENST00000562747 SPART-AS1P0CW21 52 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 CSN1S1P47710 185 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 ZNF345Q14585 488 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 C9orf47Q6ZRZ4 202 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 LINC01587Q99440 93 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 DNAH6Q9C0G6 4158 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 VPS13DQ5THJ4 4388 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 KIAA1109Q2LD37 5005 aa11.86□□□□□ -0.51
CDT1-202ENST00000562747 STAG3L2P0CL84 134 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms