RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 IQCJQ1A5X6 159 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 KLF17Q5JT82 389 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 VAX1Q5SQQ9 334 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 GLYATL3Q5SZD4 288 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 C10orf128Q5T292 105 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 GLT8D1Q68CQ7 371 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 Q6ZR03 302 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 LINC01561Q8N1V8 128 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 DEFB108BQ8NET1 73 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 OR10AD1Q8NGE0 317 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 OR8D4Q8NGM9 314 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF502Q8TBZ5 544 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF431Q8TF32 576 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 C15orf40Q8WUR7 153 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 GEMIN6Q8WXD5 167 aaKnown RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 MRPS24Q96EL2 167 aaKnown RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 LINC00477Q96M19 166 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 KCTD14Q9BQ13 255 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 GINS4Q9BRT9 223 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 OR2H1Q9GZK4 316 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 RERGLQ9H628 205 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 COMMD3Q9UBI1 195 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 ANXA10Q9UJ72 324 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 IER3IP1Q9Y5U9 82 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 HECTD4Q9Y4D8 3996 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 A0A0J9YXY3 114 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 FAM240AA0A1B0GVK7 77 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 MDFIC2A0A1B0GVS7 189 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 hADV38S2A0JD32 116 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 B4DSR2 109 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 K7EPK0 472 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 FFAR1O14842 300 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF207O43670 478 aaKnown RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 PMP2P02689 132 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 GZMBP10144 247 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 PSMB9P28065 219 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 SRP14P37108 136 aaKnown RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 RPL29P47914 159 aaKnown RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 REG1BP48304 166 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 UBE2E1P51965 193 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 AKR1C2P52895 323 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 FXYD6P3P58550 94 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 S100A10P60903 97 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 UBA52P62987 128 aaKnown RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 DEFA5Q01523 94 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 MEF2CQ06413 473 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 EIF4EBP1Q13541 118 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 PMAIP1Q13794 54 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 ENDOGQ14249 297 aaKnown RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 LAGE3Q14657 143 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 CLINT1Q14677 625 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 GLIPR1L1Q6UWM5 242 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 CBLN2Q8IUK8 224 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 GAPTQ8N292 157 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 FAM71E2Q8N5Q1 922 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 SLC35G3Q8N808 338 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 YIPF7Q8N8F6 280 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 C5orf17Q8NAS9 161 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 NUP35Q8NFH5 326 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 BPIFB6Q8NFQ5 453 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 OR10D4PQ8NGN7 298 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 OR1S1Q8NH92 325 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 SLAMF6Q96DU3 332 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 ADAT3Q96EY9 351 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 SLC25A44Q96H78 314 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 PGLYRP3Q96LB9 341 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 UBE2E2Q96LR5 201 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 PRADC1Q9BSG0 188 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 GTSF1LQ9H1H1 148 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 OR51I2Q9H344 312 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 TAS2R8Q9NYW2 309 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 TAAR3PQ9P1P4 343 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 LAMTOR3Q9UHA4 124 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 CYSLTR1Q9Y271 337 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 SIGLEC7Q9Y286 467 aa2.84□□□□□ -1.95
PRPF39-209ENST00000556353 YTHDF2Q9Y5A9 579 aaKnown RBP2.84□□□□□ -1.95
PRPF39-209ENST00000556353 ALMS1Q8TCU4 4167 aa2.84□□□□□ -1.96
PRPF39-209ENST00000556353 TRAV27A0A087WT01 109 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 TRAV5A0A0B4J249 113 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 IGHV1-69-2A0A0G2JMI3 117 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 LOC100130705A0A1B0GUX0 176 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 C5orf49A4QMS7 147 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 LRCOL1A6NCL2 159 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM212A6NML5 194 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 OR4C45A6NMZ5 311 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 H0YJW9 148 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 SMKR1H3BMG3 65 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 MYL12BO14950 172 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF682O95780 498 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 IGHMP01871 453 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 GPX1P07203 203 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 NMBP08949 121 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 CTLA4P16410 223 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 CTRLP40313 264 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 KIR2DS2P43631 304 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 GALR1P47211 349 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 RND3P61587 244 aa2.83□□□□□ -1.96
PRPF39-209ENST00000556353 RPS23P62266 143 aaKnown RBP2.83□□□□□ -1.96
PRPF39-209ENST00000556353 GRB2P62993 217 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms