RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ICAM4Q14773 271 aa7.88□□□□□ -1.15
NEDD8-205ENST00000527046 SAMD13Q5VXD3 122 aa7.88□□□□□ -1.15
NEDD8-205ENST00000527046 FOXI2Q6ZQN5 318 aa7.88□□□□□ -1.15
NEDD8-205ENST00000527046 CSNK1G2-AS1Q8NCQ2 148 aa7.88□□□□□ -1.15
NEDD8-205ENST00000527046 RPUSD4Q96CM3 377 aaKnown RBP7.88□□□□□ -1.15
NEDD8-205ENST00000527046 TM2D3Q9BRN9 247 aa7.88□□□□□ -1.15
NEDD8-205ENST00000527046 TUBA4BQ9H853 241 aa7.88□□□□□ -1.15
NEDD8-205ENST00000527046 PRKDCP78527 4128 aaKnown RBP7.88□□□□□ -1.15
NEDD8-205ENST00000527046 CXorf1O96002 111 aa7.87□□□□□ -1.15
NEDD8-205ENST00000527046 C4BPBP20851 252 aa7.87□□□□□ -1.15
NEDD8-205ENST00000527046 LYPD1Q8N2G4 141 aa7.87□□□□□ -1.15
NEDD8-205ENST00000527046 OR8A1Q8NGG7 326 aa7.87□□□□□ -1.15
NEDD8-205ENST00000527046 MRPL53Q96EL3 112 aaKnown RBP7.87□□□□□ -1.15
NEDD8-205ENST00000527046 Q9H3A6 140 aa7.87□□□□□ -1.15
NEDD8-205ENST00000527046 TRAV1-1A0A0B4J248 108 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 KIR2DL5BA0A0G2JN68 375 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 KIR2DL5BA0A0G2JPC4 375 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 MAP1LC3B2A6NCE7 125 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 PGPA6NDG6 321 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 CRXO43186 299 aaPredicted RBP7.86□□□□□ -1.15
NEDD8-205ENST00000527046 CNN1P51911 297 aaKnown RBP7.86□□□□□ -1.15
NEDD8-205ENST00000527046 PSG9Q00887 426 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 KIR3DS1Q14943 382 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 ALKAL2Q6UX46 152 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 DPPA3Q6W0C5 159 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 KIR2DL5AQ8N109 375 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 ZNF738Q8NE65 137 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 KIR2DL5BQ8NHK3 375 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 FAM213BQ8TBF2 198 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 LRRC20Q8TCA0 184 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 FAM19A4Q96LR4 140 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 MAP1LC3BQ9GZQ8 125 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 AGPAT4-IT1Q9H0P7 198 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 CSTL1Q9H114 145 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 SLC35B3Q9H1N7 401 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 OTORQ9NRC9 128 aa7.86□□□□□ -1.15
NEDD8-205ENST00000527046 YTHDF2Q9Y5A9 579 aaKnown RBP7.86□□□□□ -1.15
NEDD8-205ENST00000527046 FAM74A7A6NL05 159 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 GGTLC3B5MD39 225 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 NPIPB6E9PJ23 425 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 IGKV3-20P01619 116 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 CT45A10P0DMU9 189 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 RAB5CP51148 216 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 ERCC8Q13216 396 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 CCDC28AQ8IWP9 274 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 LYPD6BQ8NI32 183 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 SFT2D1Q8WV19 159 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 VGLL1Q99990 258 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 OVOL2Q9BRP0 275 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 RETNQ9HD89 108 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 CLEC5AQ9NY25 188 aa7.85□□□□□ -1.15
NEDD8-205ENST00000527046 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
NEDD8-205ENST00000527046 A0A1W2PRE2 83 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 DIRC3C9JPN6 131 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 IGLV2-11P01706 119 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 H2AFB1P0C5Y9 115 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 FXYD7P58549 80 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 SUMO1P63165 101 aaKnown RBP7.84□□□□□ -1.15
NEDD8-205ENST00000527046 C9orf47Q6ZRZ4 202 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 STHQ8IWL8 128 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 OR4B1Q8NGF8 309 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 TMEM167BQ9NRX6 74 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 PRELID1Q9Y255 219 aa7.84□□□□□ -1.15
NEDD8-205ENST00000527046 TENM3Q9P273 2699 aa7.84□□□□□ -1.16
NEDD8-205ENST00000527046 IGKV2-40A0A087WW87 121 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-205ENST00000527046 IGKV2D-40P01614 121 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-205ENST00000527046 RBMY1A1P0DJD3 496 aaKnown RBP7.83□□□□□ -1.16
NEDD8-205ENST00000527046 RBMY1CP0DJD4 496 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 GNG5P63218 68 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 IFITM2Q01629 132 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 HIST1H1AQ02539 215 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-205ENST00000527046 PMS2P11Q13670 270 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 RBMY1FQ15415 496 aaKnown RBP7.83□□□□□ -1.16
NEDD8-205ENST00000527046 EIF5AL1Q6IS14 154 aaKnown RBP7.83□□□□□ -1.16
NEDD8-205ENST00000527046 EBLN2Q6P2I7 272 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 TEX261Q6UWH6 196 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 Q6ZWC4 215 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 C1orf158Q8N1D5 194 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 ARL6IP6Q8N6S5 226 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 RNF183Q96D59 192 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 TVP23CQ96ET8 276 aa7.83□□□□□ -1.16
NEDD8-205ENST00000527046 COL7A1Q02388 2944 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 A0A1B0GV50 99 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 UBE2CO00762 179 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 DUSP14O95147 198 aaKnown RBP7.82□□□□□ -1.16
NEDD8-205ENST00000527046 ATP5G3P48201 142 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 UBE2G2P60604 165 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 MORN3Q6PF18 240 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-205ENST00000527046 Q6ZQT7 251 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 ZNF680Q8NEM1 530 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 AAMDCQ9H7C9 122 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 PPP1R14DQ9NXH3 145 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 XCL2Q9UBD3 114 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 EPDR1Q9UM22 224 aa7.82□□□□□ -1.16
NEDD8-205ENST00000527046 TRAV8-1A0A0A6YYK1 113 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 RBAKDNA6NC62 111 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 M0R2Z0 102 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 PAGE4O60829 102 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 CA1P00915 261 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 284 ms