RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 TGIF2-C20orf24A0A0A6YYL0 155 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 IGHV3-35A0A0C4DH35 117 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 OVOL1O14753 267 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 S100A6P06703 90 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 PFN1P07737 140 aaKnown RBP8.28□□□□□ -1.08
HMGCL-204ENST00000436439 GP9P14770 177 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 GALR1P47211 349 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 UBE2L3P68036 154 aaKnown RBP8.28□□□□□ -1.08
HMGCL-204ENST00000436439 RPEL1Q2QD12 228 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 SMUG1Q53HV7 270 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 C1orf194Q5T5A4 169 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 BPIFA4PQ86YQ2 179 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 SBSPONQ8IVN8 264 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 BTF3L4Q96K17 158 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 FAM210BQ96KR6 192 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 GPR82Q96P67 336 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 METTL26Q96S19 204 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 IMMP2LQ96T52 175 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 PYGO2Q9BRQ0 406 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 TCEAL7Q9BRU2 100 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 OR51M1Q9H341 326 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 DNAH7Q8WXX0 4024 aa8.28□□□□□ -1.08
HMGCL-204ENST00000436439 SORL1Q92673 2214 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 IGHV4OR15-8A0A075B7B6 117 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 A0A087WW49 117 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 TRAV5A0A0B4J249 113 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 A8MWP6 167 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 MRPS12O15235 138 aaKnown RBP8.27□□□□□ -1.09
HMGCL-204ENST00000436439 BUB3O43684 328 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 INSL3P51460 131 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 UNQ9165/PRO28630Q6UXU0 137 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 C2CD4CQ8TF44 421 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 FXYD5Q96DB9 178 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 PAXXQ9BUH6 204 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 DAZ1Q9NQZ3 744 aaKnown RBP8.27□□□□□ -1.09
HMGCL-204ENST00000436439 SMAD5-AS1Q9Y6J3 95 aa8.27□□□□□ -1.09
HMGCL-204ENST00000436439 C5orf52A6NGY3 159 aa8.26□□□□□ -1.09
HMGCL-204ENST00000436439 LINC01619G3V211 115 aa8.26□□□□□ -1.09
HMGCL-204ENST00000436439 SAP30O75446 220 aa8.26□□□□□ -1.09
HMGCL-204ENST00000436439 RPL7P18124 248 aaKnown RBP8.26□□□□□ -1.09
HMGCL-204ENST00000436439 KLF5Q13887 457 aaPredicted RBP8.26□□□□□ -1.09
HMGCL-204ENST00000436439 KCNIP4Q6PIL6 250 aa8.26□□□□□ -1.09
HMGCL-204ENST00000436439 DERL1Q9BUN8 251 aa8.26□□□□□ -1.09
HMGCL-204ENST00000436439 UFC1Q9Y3C8 167 aa8.26□□□□□ -1.09
HMGCL-204ENST00000436439 TRBV20OR9-2A0A075B6H5 130 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 A0A1W2PS18 150 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 GGTLC3B5MD39 225 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 UBE2CO00762 179 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 OR10J4P0C629 311 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 IGLC2P0DOY2 106 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 PYYP10082 97 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 HIST1H1EP10412 219 aaKnown RBP8.25□□□□□ -1.09
HMGCL-204ENST00000436439 RPL35P42766 123 aaKnown RBP8.25□□□□□ -1.09
HMGCL-204ENST00000436439 LEMD1Q68G75 181 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 SFRP2Q96HF1 295 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 SRD5A3Q9H8P0 318 aa8.25□□□□□ -1.09
HMGCL-204ENST00000436439 IGHV3OR16-8A0A075B7F1 116 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 A0A087X0K7 114 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 HELTA6NFD8 242 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 C3orf84H3BNL1 204 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 TYMSP04818 313 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 NBEAP1P0C6P0 100 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 FRMD6-AS1P0C7T7 363 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
HMGCL-204ENST00000436439 SUMO1P63165 101 aaKnown RBP8.24□□□□□ -1.09
HMGCL-204ENST00000436439 PDE6HQ13956 83 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 C16orf54Q6UWD8 224 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 OCC1Q8TAD7 63 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 RCHY1Q96PM5 261 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 DYNC2H1Q8NCM8 4307 aaKnown RBP8.24□□□□□ -1.09
HMGCL-204ENST00000436439 RYR2Q92736 4967 aa8.24□□□□□ -1.09
HMGCL-204ENST00000436439 TRAV9-1A0A075B6T8 112 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 IGHV7-4-1A0A0J9YVY3 117 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 ZNF320A2RRD8 509 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 ZNF253O75346 499 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 APOHP02749 345 aaPredicted RBP8.23□□□□□ -1.09
HMGCL-204ENST00000436439 BMI1P35226 326 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 GNG4P50150 75 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 MEOX2P50222 304 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 TAS2R60P59551 318 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 CASC10Q5T4H9 136 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 OR8I2Q8N0Y5 310 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 LYPD1Q8N2G4 141 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 OR10G8Q8NGN5 311 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 GRAMD2BQ96HH9 432 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 ELOVL1Q9BW60 279 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 SMPXQ9UHP9 88 aa8.23□□□□□ -1.09
HMGCL-204ENST00000436439 TRBV19A0A075B6N1 114 aa8.22□□□□□ -1.09
HMGCL-204ENST00000436439 TMEM213A2RRL7 107 aa8.22□□□□□ -1.09
HMGCL-204ENST00000436439 CHEK1O14757 476 aa8.22□□□□□ -1.09
HMGCL-204ENST00000436439 ZNF207O43670 478 aaKnown RBP8.22□□□□□ -1.09
HMGCL-204ENST00000436439 CNN1P51911 297 aaKnown RBP8.22□□□□□ -1.09
HMGCL-204ENST00000436439 SYNJ2BPP57105 145 aa8.22□□□□□ -1.09
HMGCL-204ENST00000436439 FAM3BP58499 235 aaPredicted RBP8.22□□□□□ -1.09
HMGCL-204ENST00000436439 TM4SF20Q53R12 229 aa8.22□□□□□ -1.09
HMGCL-204ENST00000436439 CENPWQ5EE01 88 aa8.22□□□□□ -1.09
HMGCL-204ENST00000436439 MUC7Q8TAX7 377 aa8.22□□□□□ -1.09
HMGCL-204ENST00000436439 ZNF586Q9NXT0 402 aa8.22□□□□□ -1.09
HMGCL-204ENST00000436439 PGPEP1LA6NFU8 196 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms