RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 GIPP09681 153 aaPredicted RBP5.7□□□□□ -1.5
SMG6-211ENST00000572369 HLA-DRB4P13762 266 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 FXYD7P58549 80 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 DEFB1P60022 68 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 PRR20EP86478 221 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 PRR20CP86479 221 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 PRR20DP86480 221 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 PRR20BP86481 221 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 PRR20AP86496 221 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 OXA1LQ15070 435 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 FAM78BQ5VT40 261 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 SPATA31B1PQ5VZV4 182 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 IGFL4Q6B9Z1 124 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 LCN15Q6UWW0 184 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 RNF182Q8N6D2 247 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 ASB13Q8WXK3 278 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 WDR61Q9GZS3 305 aaKnown RBP5.7□□□□□ -1.5
SMG6-211ENST00000572369 SAV1Q9H4B6 383 aaPredicted RBP5.7□□□□□ -1.5
SMG6-211ENST00000572369 EDA2RQ9HAV5 297 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 CLEC5AQ9NY25 188 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 HLA-DRB4X5D2U9 266 aa5.7□□□□□ -1.5
SMG6-211ENST00000572369 FXYD6-FXYD2A0A087WZ82 144 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 A0A087X0K7 114 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 TRAV5A0A0B4J249 113 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 A0A0J9YWU9 116 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 A0A0J9YX75 114 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 H3BTX0 84 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 DUSP14O95147 198 aaKnown RBP5.69□□□□□ -1.5
SMG6-211ENST00000572369 C4BPBP20851 252 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 RHOBP62745 196 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 PSG9Q00887 426 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 FFAR4Q5NUL3 377 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 GDF5OSQ5U4N7 250 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 MORN5Q5VZ52 161 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 INO80EQ8NBZ0 244 aaPredicted RBP5.69□□□□□ -1.5
SMG6-211ENST00000572369 OR2T35Q8NGX2 323 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 CHAC2Q8WUX2 184 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 C17orf77Q96MU5 243 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 SLC50A1Q9BRV3 221 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 XCL2Q9UBD3 114 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 TIMM9Q9Y5J7 89 aa5.69□□□□□ -1.5
SMG6-211ENST00000572369 IGHV3OR16-12A0A075B7B8 117 aa5.68□□□□□ -1.5
SMG6-211ENST00000572369 ZNF705DP0CH99 300 aaPredicted RBP5.68□□□□□ -1.5
SMG6-211ENST00000572369 ZNF705BP0CI00 300 aaPredicted RBP5.68□□□□□ -1.5
SMG6-211ENST00000572369 CXCL2P19875 107 aa5.68□□□□□ -1.5
SMG6-211ENST00000572369 HLA-DMBP28068 263 aa5.68□□□□□ -1.5
SMG6-211ENST00000572369 HIST1H1AQ02539 215 aaPredicted RBP5.68□□□□□ -1.5
SMG6-211ENST00000572369 PSG3Q16557 428 aa5.68□□□□□ -1.5
SMG6-211ENST00000572369 GUK1Q16774 197 aa5.68□□□□□ -1.5
SMG6-211ENST00000572369 GCSAMLQ5JQS6 135 aa5.68□□□□□ -1.5
SMG6-211ENST00000572369 MFFQ9GZY8 342 aa5.68□□□□□ -1.5
SMG6-211ENST00000572369 HRH4Q9H3N8 390 aa5.68□□□□□ -1.5
SMG6-211ENST00000572369 ZNF331Q9NQX6 463 aaPredicted RBP5.68□□□□□ -1.5
SMG6-211ENST00000572369 HUWE1Q7Z6Z7 4374 aaKnown RBP5.68□□□□□ -1.5
SMG6-211ENST00000572369 DNAH10Q8IVF4 4471 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 TRAV8-2A0A0B4J237 113 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 A0A1W2PPV4 95 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 CXorf65A6NEN9 183 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 MRPS12O15235 138 aaKnown RBP5.67□□□□□ -1.5
SMG6-211ENST00000572369 DEFB4AO15263 64 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 OR7C2O60412 319 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 CNN1P51911 297 aaKnown RBP5.67□□□□□ -1.5
SMG6-211ENST00000572369 PMS2P11Q13670 270 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 ZNF266Q14584 549 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 ACOT6Q3I5F7 207 aaPredicted RBP5.67□□□□□ -1.5
SMG6-211ENST00000572369 HSD17B11Q8NBQ5 300 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 OR10J6PQ8NGY7 276 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 BLNKQ8WV28 456 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 RPUSD4Q96CM3 377 aaKnown RBP5.67□□□□□ -1.5
SMG6-211ENST00000572369 TMEM208Q9BTX3 173 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 MRPL32Q9BYC8 188 aaKnown RBP5.67□□□□□ -1.5
SMG6-211ENST00000572369 SLC35B3Q9H1N7 401 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 AAMDCQ9H7C9 122 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 PLA2G2EQ9NZK7 142 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 FUT9Q9Y231 359 aa5.67□□□□□ -1.5
SMG6-211ENST00000572369 BORCS7-ASMTA0A0B4J1R7 106 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 ZNF705FA8MVS1 300 aaPredicted RBP5.66□□□□□ -1.5
SMG6-211ENST00000572369 H3BQ15 152 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 SLC17A3O00476 420 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 AMBPP02760 352 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 GIG44P09565 113 aaPredicted RBP5.66□□□□□ -1.5
SMG6-211ENST00000572369 OR10J4P0C629 311 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 IGLC2P0DOY2 106 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 PYYP10082 97 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 PRB4P10163 310 aaPredicted RBP5.66□□□□□ -1.5
SMG6-211ENST00000572369 HIST1H1EP10412 219 aaKnown RBP5.66□□□□□ -1.5
SMG6-211ENST00000572369 MIFP14174 115 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 TAS2R45P59539 299 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 KHDC3LQ587J8 217 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 Q5BKY6 102 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 MIR17HGQ75NE6 70 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 OR8A1Q8NGG7 326 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 CLUHP3Q96NS8 147 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 AQP10Q96PS8 301 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 PAXXQ9BUH6 204 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 SLC25A2Q9BXI2 301 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 PARD6GQ9BYG4 376 aaPredicted RBP5.66□□□□□ -1.5
SMG6-211ENST00000572369 OR51M1Q9H341 326 aa5.66□□□□□ -1.5
SMG6-211ENST00000572369 WFDC1Q9HC57 220 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms