RNA–Protein interactions for RNA: ENST00000567657.5

NEIL1-215, Transcript of nei like DNA glycosylase 1, human

TSL 3

Gene NEIL1, Length 780 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEIL1-215	ENST00000567657	RPL29	P47914	159 aa	Known RBP	13.74	□□□□□ -0.21
NEIL1-215	ENST00000567657	NANOS2	P60321	138 aa	Known RBP	13.74	□□□□□ -0.21
NEIL1-215	ENST00000567657		Q8NAQ8	132 aa		13.74	□□□□□ -0.21
NEIL1-215	ENST00000567657	GPR82	Q96P67	336 aa		13.74	□□□□□ -0.21
NEIL1-215	ENST00000567657	RPRM	Q9NS64	109 aa		13.74	□□□□□ -0.21
NEIL1-215	ENST00000567657	HSPB11	Q9Y547	144 aa		13.74	□□□□□ -0.21
NEIL1-215	ENST00000567657	IGHV3OR16-12	A0A075B7B8	117 aa		13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657	CXorf65	A6NEN9	183 aa		13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657	EIF3G	O75821	320 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657	MEOX2	P50222	304 aa		13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657	PXDC1	Q5TGL8	231 aa		13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657	EBLN2	Q6P2I7	272 aa		13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657		Q6ZRG5	221 aa		13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657	ZNF738	Q8NE65	137 aa		13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657	MED28	Q9H204	178 aa		13.73	□□□□□ -0.21
NEIL1-215	ENST00000567657		A0A087X0K7	114 aa		13.72	□□□□□ -0.21
NEIL1-215	ENST00000567657	PRAC2	D3DTV9	90 aa		13.72	□□□□□ -0.21
NEIL1-215	ENST00000567657	PRM2	P04554	102 aa		13.72	□□□□□ -0.21
NEIL1-215	ENST00000567657	RPL12	P30050	165 aa	Known RBP	13.72	□□□□□ -0.21
NEIL1-215	ENST00000567657	LRRC20	Q8TCA0	184 aa		13.72	□□□□□ -0.21
NEIL1-215	ENST00000567657	ALMS1	Q8TCU4	4167 aa		13.72	□□□□□ -0.21
NEIL1-215	ENST00000567657	HYDIN	Q4G0P3	5121 aa		13.72	□□□□□ -0.21
NEIL1-215	ENST00000567657	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.71	□□□□□ -0.21
NEIL1-215	ENST00000567657	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.71	□□□□□ -0.21
NEIL1-215	ENST00000567657	CNN1	P51911	297 aa	Known RBP	13.71	□□□□□ -0.21
NEIL1-215	ENST00000567657	PSG9	Q00887	426 aa		13.71	□□□□□ -0.21
NEIL1-215	ENST00000567657	AMTN	Q6UX39	209 aa		13.71	□□□□□ -0.21
NEIL1-215	ENST00000567657	WDR61	Q9GZS3	305 aa	Known RBP	13.71	□□□□□ -0.21
NEIL1-215	ENST00000567657	MFF	Q9GZY8	342 aa		13.71	□□□□□ -0.21
NEIL1-215	ENST00000567657		M0R2Z0	102 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	IGLC2	P0DOY2	106 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	PYY	P10082	97 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	S100A7	P31151	101 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	PSG3	Q16557	428 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	ZNF767P	Q75MW2	155 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	MIR17HG	Q75NE6	70 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	BPIFA4P	Q86YQ2	179 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	OR1L4	Q8NGR5	311 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	ATP5S	Q99766	215 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	ZNF586	Q9NXT0	402 aa		13.7	□□□□□ -0.22
NEIL1-215	ENST00000567657	HIST1H1A	Q02539	215 aa	Predicted RBP	13.69	□□□□□ -0.22
NEIL1-215	ENST00000567657	SPINK13	Q1W4C9	94 aa		13.69	□□□□□ -0.22
NEIL1-215	ENST00000567657	CHAC2	Q8WUX2	184 aa		13.69	□□□□□ -0.22
NEIL1-215	ENST00000567657	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.69	□□□□□ -0.22
NEIL1-215	ENST00000567657	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.69	□□□□□ -0.22
NEIL1-215	ENST00000567657	CELA1	Q9UNI1	258 aa		13.69	□□□□□ -0.22
NEIL1-215	ENST00000567657	NUTF2	P61970	127 aa	Known RBP	13.68	□□□□□ -0.22
NEIL1-215	ENST00000567657	RGS21	Q2M5E4	152 aa		13.68	□□□□□ -0.22
NEIL1-215	ENST00000567657	C1orf158	Q8N1D5	194 aa		13.68	□□□□□ -0.22
NEIL1-215	ENST00000567657	RPUSD4	Q96CM3	377 aa	Known RBP	13.68	□□□□□ -0.22
NEIL1-215	ENST00000567657	SAT2	Q96F10	170 aa	Predicted RBP	13.68	□□□□□ -0.22
NEIL1-215	ENST00000567657	SLC25A2	Q9BXI2	301 aa		13.68	□□□□□ -0.22
NEIL1-215	ENST00000567657	TRAV12-2	A0A075B6T6	113 aa		13.67	□□□□□ -0.22
NEIL1-215	ENST00000567657	OXA1L	Q15070	435 aa		13.67	□□□□□ -0.22
NEIL1-215	ENST00000567657	BAP18	Q8IXM2	172 aa		13.67	□□□□□ -0.22
NEIL1-215	ENST00000567657	OR8A1	Q8NGG7	326 aa		13.67	□□□□□ -0.22
NEIL1-215	ENST00000567657	C11orf45	Q8TAV5	145 aa		13.67	□□□□□ -0.22
NEIL1-215	ENST00000567657	PFDN5	Q99471	154 aa		13.67	□□□□□ -0.22
NEIL1-215	ENST00000567657	C11orf68	Q9H3H3	251 aa	Known RBP	13.67	□□□□□ -0.22
NEIL1-215	ENST00000567657		A8MTW9	85 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	MPDU1	O75352	247 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	PET100	P0DJ07	73 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	EMP1	P54849	157 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	KIR3DS1	Q14943	382 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	TMEM41B	Q5BJD5	291 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	SAMD13	Q5VXD3	122 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	LCN15	Q6UWW0	184 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	S100A7A	Q86SG5	101 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	BLNK	Q8WV28	456 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	FAM167A-AS1	Q96KT0	104 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	HRH4	Q9H3N8	390 aa		13.66	□□□□□ -0.22
NEIL1-215	ENST00000567657	CRX	O43186	299 aa	Predicted RBP	13.65	□□□□□ -0.22
NEIL1-215	ENST00000567657	NDUFB4	O95168	129 aa		13.65	□□□□□ -0.22
NEIL1-215	ENST00000567657	RHOB	P62745	196 aa		13.65	□□□□□ -0.22
NEIL1-215	ENST00000567657	FFAR4	Q5NUL3	377 aa		13.65	□□□□□ -0.22
NEIL1-215	ENST00000567657	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.65	□□□□□ -0.22
NEIL1-215	ENST00000567657	C1QTNF4	Q9BXJ3	329 aa		13.65	□□□□□ -0.22
NEIL1-215	ENST00000567657	PLA2G2E	Q9NZK7	142 aa		13.65	□□□□□ -0.22
NEIL1-215	ENST00000567657	LCE6A	A0A183	80 aa		13.64	□□□□□ -0.23
NEIL1-215	ENST00000567657		M0R3E3	92 aa		13.64	□□□□□ -0.23
NEIL1-215	ENST00000567657	MIF	P14174	115 aa		13.64	□□□□□ -0.23
NEIL1-215	ENST00000567657	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.64	□□□□□ -0.23
NEIL1-215	ENST00000567657	EXOC3-AS1	Q8N2X6	119 aa		13.64	□□□□□ -0.23
NEIL1-215	ENST00000567657	CLUHP3	Q96NS8	147 aa		13.64	□□□□□ -0.23
NEIL1-215	ENST00000567657	SMLR1	H3BR10	107 aa		13.63	□□□□□ -0.23
NEIL1-215	ENST00000567657	DUSP14	O95147	198 aa	Known RBP	13.63	□□□□□ -0.23
NEIL1-215	ENST00000567657	OR10J4	P0C629	311 aa		13.63	□□□□□ -0.23
NEIL1-215	ENST00000567657	SCGB1C1	Q8TD33	95 aa		13.63	□□□□□ -0.23
NEIL1-215	ENST00000567657	ZNF503	Q96F45	646 aa		13.63	□□□□□ -0.23
NEIL1-215	ENST00000567657	SLC50A1	Q9BRV3	221 aa		13.63	□□□□□ -0.23
NEIL1-215	ENST00000567657	TRBV19	A0A075B6N1	114 aa		13.62	□□□□□ -0.23
NEIL1-215	ENST00000567657	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.62	□□□□□ -0.23
NEIL1-215	ENST00000567657		J3KRW8	73 aa		13.62	□□□□□ -0.23
NEIL1-215	ENST00000567657	IFNA5	P01569	189 aa		13.62	□□□□□ -0.23
NEIL1-215	ENST00000567657	CXCL2	P19875	107 aa		13.62	□□□□□ -0.23
NEIL1-215	ENST00000567657	RNF24	Q9Y225	148 aa		13.62	□□□□□ -0.23
NEIL1-215	ENST00000567657		G3V3Q6	166 aa		13.61	□□□□□ -0.23
NEIL1-215	ENST00000567657	GIP	P09681	153 aa	Predicted RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms