RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 RANP62826 216 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 KLF5Q13887 457 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 RHEBQ15382 184 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 TMEM241Q24JQ0 296 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 TCTEX1D4Q5JR98 221 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 UNQ9165/PRO28630Q6UXU0 137 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 SIGLEC15Q6ZMC9 328 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 OR11H1Q8NG94 326 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 OR1N2Q8NGR9 330 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 GLMPQ8WWB7 406 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 TVP23CQ96ET8 276 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 SMIM12Q96EX1 92 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 SMIM7Q9BQ49 75 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 ATG101Q9BSB4 218 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 SMPXQ9UHP9 88 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 EPDR1Q9UM22 224 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 LY96Q9Y6Y9 160 aa6.22□□□□□ -1.41
TOPBP1-202ENST00000503338 IGHV3OR16-8A0A075B7F1 116 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 SCO2A0A1W2PP80 73 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 C9JCJ5 164 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 PEX7O00628 323 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 CHEK1O14757 476 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 NDUFB4O95168 129 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 ZNF674Q2M3X9 581 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 NDUFA11Q86Y39 141 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 CLRN3Q8NCR9 226 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 C2CD4CQ8TF44 421 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 MRPL53Q96EL3 112 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 RHPN1-AS1Q9BWJ2 59 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 ZNF331Q9NQX6 463 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 CELSR1Q9NYQ6 3014 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 OTOGQ6ZRI0 2925 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 F8P00451 2351 aa6.21□□□□□ -1.42
TOPBP1-202ENST00000503338 TMEM213A2RRL7 107 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 M0R036 132 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 CCL24O00175 119 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 ZNF207O43670 478 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 CD28P10747 220 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 SYNJ2BPP57105 145 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 UBE2G1P62253 170 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 FHL3Q13643 280 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 TM4SF20Q53R12 229 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 FMC1Q96HJ9 113 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 SDF2L1Q9HCN8 221 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 NRN1Q9NPD7 142 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 BIN3Q9NQY0 253 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 SMAD5-AS1Q9Y6J3 95 aa6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 FN1P02751 2386 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-202ENST00000503338 A0A087WWC5 75 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 TRBV6-1A0A0K0K1D8 114 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 RBAKDNA6NC62 111 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 C2orf70A6NJV1 201 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 APOHP02749 345 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 TCRAP04437 139 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 ID1P41134 155 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 RPL35P42766 123 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 GNG4P50150 75 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 PAFAH1B2P68402 229 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 GUCA2BQ16661 112 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 TMEM183BQ1AE95 376 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 C8orf86Q6ZUL3 223 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 TMEM75Q8N9X5 138 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 OR9G4Q8NGQ1 327 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 CITED2Q99967 270 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 SIGLEC8Q9NYZ4 499 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 MLXQ9UH92 298 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 KLF12Q9Y4X4 402 aa6.19□□□□□ -1.42
TOPBP1-202ENST00000503338 MXRA5Q9NR99 2828 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 HIVEP1P15822 2718 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 IGHV3OR16-13A0A075B7E8 117 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 IGHV3-49A0A0A0MS15 119 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 IGHV3-74A0A0B4J1X5 117 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 TRAV2A0A0B4J234 112 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 IGHV3-66A0A0C4DH42 116 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 SLC17A3O00476 420 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 ISLRO14498 428 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 PPP1R2P9O14990 202 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 MT-ND4LP03901 98 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 CBLN1P23435 193 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 SLURP1P55000 103 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 RPL11P62913 178 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 AWAT1Q58HT5 328 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 C18orf65Q6ZTR6 163 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 TCF24Q7RTU0 167 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 EXOC3-AS1Q8N2X6 119 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 ANAPC16Q96DE5 110 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 RAX2Q96IS3 184 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 C16orf92Q96LL3 132 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 C17orf77Q96MU5 243 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 CTDSP1Q9GZU7 261 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 TMEM242Q9NWH2 141 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 ZFP30Q9Y2G7 519 aa6.18□□□□□ -1.42
TOPBP1-202ENST00000503338 TRAV25A0A0B4J276 109 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 C7orf77A4D0Y5 90 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 CXorf65A6NEN9 183 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 DIRC3C9JPN6 131 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 H3BTX0 84 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 DNASE2O00115 360 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 SNRPCP09234 159 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms