RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 BORCS5Q969J3 196 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 NPCDR1Q9BY65 106 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 POPDC3Q9HBV1 291 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 BCL2L10Q9HD36 194 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 CBLN4Q9NTU7 201 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 HIGD1AQ9Y241 93 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 OVOS2A0A0G2JMS6 1433 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 FAM135BQ49AJ0 1406 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 RIC1Q4ADV7 1423 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 TRAPPC8Q9Y2L5 1435 aa0.88□□□□□ -2.27
SSB-209ENST00000470621 PEG3Q9GZU2 1588 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 TCOF1Q13428 1488 aaKnown RBP0.87□□□□□ -2.27
SSB-209ENST00000470621 MYH10P35580 1976 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 TRBV7-6A0A0J9YX20 115 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 TIMM17BO60830 172 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 GGCTO75223 188 aaKnown RBP0.87□□□□□ -2.27
SSB-209ENST00000470621 GADD45GO95257 159 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 TCL1BO95988 128 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 MT-ND4LP03901 98 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 ASAH2BP0C7U1 165 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 NFYAP23511 347 aaPredicted RBP0.87□□□□□ -2.27
SSB-209ENST00000470621 HBBP68871 147 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 ZNF846Q147U1 533 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 SMIM21Q3B7S5 101 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 BCL2L15Q5TBC7 163 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 RPS19BP1Q86WX3 136 aaKnown RBP0.87□□□□□ -2.27
SSB-209ENST00000470621 PPTC7Q8NI37 304 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 OR2H1Q9GZK4 316 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 CACYBPQ9HB71 228 aaKnown RBP0.87□□□□□ -2.27
SSB-209ENST00000470621 NISCHQ9Y2I1 1504 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 PIK3C2AO00443 1686 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 CACNA1BQ00975 2339 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 SYNJ1O43426 1573 aa0.87□□□□□ -2.27
SSB-209ENST00000470621 NCAPD3P42695 1498 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 ARHGEF11O15085 1522 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 IGHV1-58A0A0C4DH39 117 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 A0A0D9SG52 128 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 TMEM189A5PLL7 270 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 ARL5CA6NH57 179 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 M0QZK8 103 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 HCRTO43612 131 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 LYZL6O75951 148 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 PMP2P02689 132 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 MGST1P10620 155 aaKnown RBP0.86□□□□□ -2.27
SSB-209ENST00000470621 FABP2P12104 132 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 SDC2P34741 201 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 SSR2P43308 183 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 HIST1H1AQ02539 215 aaPredicted RBP0.86□□□□□ -2.27
SSB-209ENST00000470621 ESRGQ1W209 222 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 VMA21Q3ZAQ7 101 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 CCDC153Q494R4 210 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 MORN2Q502X0 79 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 RNASE10Q5GAN6 216 aaKnown RBP0.86□□□□□ -2.27
SSB-209ENST00000470621 C1orf134Q5TEV5 83 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 TMEM14EPQ6UXP3 125 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 DEFB128Q7Z7B8 93 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 Q8N814 137 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 OR8B3Q8NGG8 313 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 POP5Q969H6 163 aaKnown RBP0.86□□□□□ -2.27
SSB-209ENST00000470621 DIRC1Q969H9 104 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 ISOC1Q96CN7 298 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 YPEL2Q96QA6 119 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 TMEM138Q9NPI0 162 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 HSPB8Q9UJY1 196 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 HS3ST2Q9Y278 367 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 LAMTOR2Q9Y2Q5 125 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 NCOA3Q9Y6Q9 1424 aa0.86□□□□□ -2.27
SSB-209ENST00000470621 RTL9Q8NET4 1388 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 TAF1LQ8IZX4 1826 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 TRGV10A0A0A0MS01 117 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 TRAV5A0A0B4J249 113 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 TRBV27A0A0K0K1C4 114 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 C7orf71A4D174 169 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 C2orf70A6NJV1 201 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 SDCBPO00560 298 aaPredicted RBP0.85□□□□□ -2.27
SSB-209ENST00000470621 RER1O15258 196 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 OR1I1O60431 355 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 HIST1H2BKO60814 126 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 PFDN1O60925 122 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 CST7O76096 145 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 FAM107AO95990 144 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 HIST1H2BJP06899 126 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 SCTP09683 121 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 KDELR1P24390 212 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 ZNF93P35789 620 aaPredicted RBP0.85□□□□□ -2.27
SSB-209ENST00000470621 RPL35P42766 123 aaKnown RBP0.85□□□□□ -2.27
SSB-209ENST00000470621 RAB5CP51148 216 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 FOXA3P55318 350 aaPredicted RBP0.85□□□□□ -2.27
SSB-209ENST00000470621 DIAPH2-AS1Q14236 149 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 GLYATL3Q5SZD4 288 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 DPPA3Q6W0C5 159 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 LINC00305Q7Z4B0 112 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 OR8I2Q8N0Y5 310 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 WFDC11Q8NEX6 87 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 CCL4L1Q8NHW4 92 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 BRK1Q8WUW1 75 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 NAT14Q8WUY8 206 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 SLC50A1Q9BRV3 221 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 REG4Q9BYZ8 158 aa0.85□□□□□ -2.27
SSB-209ENST00000470621 LAMTOR3Q9UHA4 124 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms