RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 KCNIP2Q9NS61 270 aa11.81□□□□□ -0.52
SMPD4-214ENST00000455548 HSPB11Q9Y547 144 aa11.81□□□□□ -0.52
SMPD4-214ENST00000455548 CXCL3P19876 107 aa11.8□□□□□ -0.52
SMPD4-214ENST00000455548 RPL12P30050 165 aaKnown RBP11.8□□□□□ -0.52
SMPD4-214ENST00000455548 PMS2P11Q13670 270 aa11.8□□□□□ -0.52
SMPD4-214ENST00000455548 PSG3Q16557 428 aa11.8□□□□□ -0.52
SMPD4-214ENST00000455548 MORN5Q5VZ52 161 aa11.8□□□□□ -0.52
SMPD4-214ENST00000455548 IGFL4Q6B9Z1 124 aa11.8□□□□□ -0.52
SMPD4-214ENST00000455548 SLC50A1Q9BRV3 221 aa11.8□□□□□ -0.52
SMPD4-214ENST00000455548 MBD2Q9UBB5 411 aa11.8□□□□□ -0.52
SMPD4-214ENST00000455548 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
SMPD4-214ENST00000455548 NUPR2A6NF83 97 aa11.79□□□□□ -0.52
SMPD4-214ENST00000455548 ATP5SQ99766 215 aa11.79□□□□□ -0.52
SMPD4-214ENST00000455548 MFFQ9GZY8 342 aa11.79□□□□□ -0.52
SMPD4-214ENST00000455548 HRH4Q9H3N8 390 aa11.79□□□□□ -0.52
SMPD4-214ENST00000455548 ZNF331Q9NQX6 463 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-214ENST00000455548 X6R8D5 127 aa11.79□□□□□ -0.52
SMPD4-214ENST00000455548 C17orf112F2Z3M2 114 aa11.78□□□□□ -0.52
SMPD4-214ENST00000455548 DEFB4AO15263 64 aa11.78□□□□□ -0.52
SMPD4-214ENST00000455548 AMBPP02760 352 aa11.78□□□□□ -0.52
SMPD4-214ENST00000455548 FXYD7P58549 80 aa11.78□□□□□ -0.52
SMPD4-214ENST00000455548 GUK1Q16774 197 aa11.78□□□□□ -0.52
SMPD4-214ENST00000455548 C11orf45Q8TAV5 145 aa11.78□□□□□ -0.52
SMPD4-214ENST00000455548 WDR61Q9GZS3 305 aaKnown RBP11.78□□□□□ -0.52
SMPD4-214ENST00000455548 SLC35B3Q9H1N7 401 aa11.78□□□□□ -0.52
SMPD4-214ENST00000455548 DYNC2H1Q8NCM8 4307 aaKnown RBP11.77□□□□□ -0.53
SMPD4-214ENST00000455548 TRAV5A0A0B4J249 113 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 IFNA5P01569 189 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 RBMY1A1P0DJD3 496 aaKnown RBP11.77□□□□□ -0.53
SMPD4-214ENST00000455548 RBMY1CP0DJD4 496 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 IGLC2P0DOY2 106 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 CNN1P51911 297 aaKnown RBP11.77□□□□□ -0.53
SMPD4-214ENST00000455548 RBMY1FQ15415 496 aaKnown RBP11.77□□□□□ -0.53
SMPD4-214ENST00000455548 FCN2Q15485 313 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 RGS21Q2M5E4 152 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 ASB13Q8WXK3 278 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 NEU1Q99519 415 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 LYSTQ99698 3801 aa11.77□□□□□ -0.53
SMPD4-214ENST00000455548 LCE6AA0A183 80 aa11.76□□□□□ -0.53
SMPD4-214ENST00000455548 JTBO76095 146 aa11.76□□□□□ -0.53
SMPD4-214ENST00000455548 HLA-DMBP28068 263 aa11.76□□□□□ -0.53
SMPD4-214ENST00000455548 CEMP1Q6PRD7 247 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-214ENST00000455548 ZNF705AQ6ZN79 300 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-214ENST00000455548 OR11H7Q8NGC8 314 aa11.76□□□□□ -0.53
SMPD4-214ENST00000455548 OR8A1Q8NGG7 326 aa11.76□□□□□ -0.53
SMPD4-214ENST00000455548 RPUSD4Q96CM3 377 aaKnown RBP11.76□□□□□ -0.53
SMPD4-214ENST00000455548 TMEM14CQ9P0S9 112 aa11.76□□□□□ -0.53
SMPD4-214ENST00000455548 KLK5Q9Y337 293 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-214ENST00000455548 GOLT1BQ9Y3E0 138 aa11.76□□□□□ -0.53
SMPD4-214ENST00000455548 SMIM9A6NGZ8 99 aa11.75□□□□□ -0.53
SMPD4-214ENST00000455548 ZNF705FA8MVS1 300 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-214ENST00000455548 H3BQ15 152 aa11.75□□□□□ -0.53
SMPD4-214ENST00000455548 SLC17A3O00476 420 aa11.75□□□□□ -0.53
SMPD4-214ENST00000455548 ZNF253O75346 499 aa11.75□□□□□ -0.53
SMPD4-214ENST00000455548 SNRPCP09234 159 aaKnown RBP11.75□□□□□ -0.53
SMPD4-214ENST00000455548 ZNF705DP0CH99 300 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-214ENST00000455548 ZNF705BP0CI00 300 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-214ENST00000455548 NANOS2P60321 138 aaKnown RBP11.75□□□□□ -0.53
SMPD4-214ENST00000455548 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-214ENST00000455548 SCGB1C1Q8TD33 95 aa11.75□□□□□ -0.53
SMPD4-214ENST00000455548 PHLDA1Q8WV24 401 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-214ENST00000455548 SAT2Q96F10 170 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-214ENST00000455548 PARD6GQ9BYG4 376 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-214ENST00000455548 H3BTX0 84 aa11.74□□□□□ -0.53
SMPD4-214ENST00000455548 GIPP09681 153 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-214ENST00000455548 GCSAMLQ5JQS6 135 aa11.74□□□□□ -0.53
SMPD4-214ENST00000455548 IGF2BP2-AS1Q96M15 143 aa11.74□□□□□ -0.53
SMPD4-214ENST00000455548 SMIM3Q9BZL3 60 aa11.74□□□□□ -0.53
SMPD4-214ENST00000455548 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
SMPD4-214ENST00000455548 RYR3Q15413 4870 aa11.73□□□□□ -0.53
SMPD4-214ENST00000455548 IGHV3OR16-12A0A075B7B8 117 aa11.73□□□□□ -0.53
SMPD4-214ENST00000455548 TMEM189A5PLL7 270 aa11.73□□□□□ -0.53
SMPD4-214ENST00000455548 BOLA2-SMG1P6H3BVE0 249 aa11.73□□□□□ -0.53
SMPD4-214ENST00000455548 HIST1H1EP10412 219 aaKnown RBP11.73□□□□□ -0.53
SMPD4-214ENST00000455548 RHOBP62745 196 aa11.73□□□□□ -0.53
SMPD4-214ENST00000455548 PDE6HQ13956 83 aa11.73□□□□□ -0.53
SMPD4-214ENST00000455548 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
SMPD4-214ENST00000455548 MRPL32Q9BYC8 188 aaKnown RBP11.73□□□□□ -0.53
SMPD4-214ENST00000455548 ZNF586Q9NXT0 402 aa11.73□□□□□ -0.53
SMPD4-214ENST00000455548 RFNGQ9Y644 331 aa11.73□□□□□ -0.53
SMPD4-214ENST00000455548 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
SMPD4-214ENST00000455548 M0R2Z0 102 aa11.72□□□□□ -0.53
SMPD4-214ENST00000455548 INSP01308 110 aa11.72□□□□□ -0.53
SMPD4-214ENST00000455548 SPINK13Q1W4C9 94 aa11.72□□□□□ -0.53
SMPD4-214ENST00000455548 FFAR4Q5NUL3 377 aa11.72□□□□□ -0.53
SMPD4-214ENST00000455548 C1orf158Q8N1D5 194 aa11.72□□□□□ -0.53
SMPD4-214ENST00000455548 TMEM208Q9BTX3 173 aa11.72□□□□□ -0.53
SMPD4-214ENST00000455548 PYYP10082 97 aa11.71□□□□□ -0.53
SMPD4-214ENST00000455548 OXA1LQ15070 435 aa11.71□□□□□ -0.53
SMPD4-214ENST00000455548 MIR17HGQ75NE6 70 aa11.71□□□□□ -0.53
SMPD4-214ENST00000455548 FAM167A-AS1Q96KT0 104 aa11.71□□□□□ -0.53
SMPD4-214ENST00000455548 SLC25A2Q9BXI2 301 aa11.71□□□□□ -0.53
SMPD4-214ENST00000455548 FUT9Q9Y231 359 aa11.71□□□□□ -0.53
SMPD4-214ENST00000455548 PRELID1Q9Y255 219 aa11.71□□□□□ -0.53
SMPD4-214ENST00000455548 TIMM9Q9Y5J7 89 aa11.71□□□□□ -0.53
SMPD4-214ENST00000455548 C11orf94C9JXX5 98 aa11.7□□□□□ -0.54
SMPD4-214ENST00000455548 HBE1P02100 147 aa11.7□□□□□ -0.54
SMPD4-214ENST00000455548 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
SMPD4-214ENST00000455548 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms