RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ATG101Q9BSB4 218 aa5.14□□□□□ -1.59
HDAC9-216ENST00000446646 SCRT1Q9BWW7 348 aa5.14□□□□□ -1.59
HDAC9-216ENST00000446646 UFC1Q9Y3C8 167 aa5.14□□□□□ -1.59
HDAC9-216ENST00000446646 TRAV30A0A087WSZ9 112 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 A0A0G2JRQ6 117 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 OR2T8A6NH00 312 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 LGALS9O00182 355 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 TCAPO15273 167 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 SNAI2O43623 268 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 NXPH3O95157 252 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 MT-CO2P00403 227 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 IFNA5P01569 189 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 IGHV3-23P01764 117 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 IFNA4P05014 189 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 PVALBP20472 110 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-216ENST00000446646 NKX2-1P43699 371 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-216ENST00000446646 MFAP2P55001 183 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 C2orf83Q53S99 150 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 PXDC1Q5TGL8 231 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 GGNBP1Q5YKI7 109 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 FAM159AQ6UWV7 190 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 Q6ZR54 194 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 GPHB5Q86YW7 130 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 BOD1L2Q8IYS8 172 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 OR2K2Q8NGT1 345 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 C11orf45Q8TAV5 145 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 ZNF431Q8TF32 576 aaPredicted RBP5.13□□□□□ -1.59
HDAC9-216ENST00000446646 MARC2Q969Z3 335 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 NARS2Q96I59 477 aaKnown RBP5.13□□□□□ -1.59
HDAC9-216ENST00000446646 SLC35E1Q96K37 410 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 GINS3Q9BRX5 216 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 TP53TG1Q9Y2A0 90 aa5.13□□□□□ -1.59
HDAC9-216ENST00000446646 A8MWP6 167 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 DIRC3C9JPN6 131 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 PPP5D1E7EU14 171 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 K7EIM0 57 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 NDUFA4O00483 81 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 SYNGR2O43760 224 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 PTTG1O95997 202 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 IL5P05113 134 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 RNASE2P10153 161 aaKnown RBP5.12□□□□□ -1.59
HDAC9-216ENST00000446646 S100A7P31151 101 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 IAH1Q2TAA2 248 aaPredicted RBP5.12□□□□□ -1.59
HDAC9-216ENST00000446646 GSG1LQ6UXU4 331 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 C19orf35Q6ZS72 473 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 Q6ZWC4 215 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 TMEM61Q8N0U2 210 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 C12orf45Q8N5I9 185 aaPredicted RBP5.12□□□□□ -1.59
HDAC9-216ENST00000446646 RBKSQ9H477 322 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 DAZ1Q9NQZ3 744 aaKnown RBP5.12□□□□□ -1.59
HDAC9-216ENST00000446646 TECRQ9NZ01 308 aaKnown RBP5.12□□□□□ -1.59
HDAC9-216ENST00000446646 S4R3C0 116 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 TNXBP22105 4242 aa5.12□□□□□ -1.59
HDAC9-216ENST00000446646 IGHV3-21A0A0B4J1V1 117 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 SNRPGP15A8MWD9 76 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 EPM2AB3EWF7 344 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 INMT-MINDY4F8WBC2 141 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 I3L2K1 104 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 SSSCA1O60232 199 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 PITX3O75364 302 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 ADAP1O75689 374 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 YIF1AO95070 293 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 PPBPP02775 128 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 CD5P06127 495 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 SMIM6P0DI80 62 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 RPL35AP18077 110 aaKnown RBP5.11□□□□□ -1.59
HDAC9-216ENST00000446646 ID1P41134 155 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 FAM3BP58499 235 aaPredicted RBP5.11□□□□□ -1.59
HDAC9-216ENST00000446646 CYCSP99999 105 aaKnown RBP5.11□□□□□ -1.59
HDAC9-216ENST00000446646 GAGE1Q13065 139 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 SLC16A13Q7RTY0 426 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 NRARPQ7Z6K4 114 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 MTURNQ8N3F0 131 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 POM121L12Q8N7R1 296 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 OR1S2Q8NGQ3 325 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 OR4X1Q8NH49 305 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 TMEM190Q8WZ59 177 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 C18orf15Q96N68 181 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 TCEAL7Q9BRU2 100 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 GSKIPQ9P0R6 139 aa5.11□□□□□ -1.59
HDAC9-216ENST00000446646 CSDC2Q9Y534 153 aaKnown RBP5.11□□□□□ -1.59
HDAC9-216ENST00000446646 IGHV4-4A0A075B6R2 117 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 A0A1W2PS18 150 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 C2orf70A6NJV1 201 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 C15orf62A8K5M9 175 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 SSNA1O43805 119 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 RLN2P04090 185 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 RBMY1CP0DJD4 496 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 IAPPP10997 89 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 FOLR2P14207 255 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 EIF2B2P49770 351 aaKnown RBP5.1□□□□□ -1.59
HDAC9-216ENST00000446646 MEOX2P50222 304 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 RND2P52198 227 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 TAS2R30P59541 319 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 S100A10P60903 97 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 HERV-K104P63124 156 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 AKR1C1Q04828 323 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 LGALS9BQ3B8N2 356 aa5.1□□□□□ -1.59
HDAC9-216ENST00000446646 SPANXN5Q5MJ07 72 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms