RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FCN1O00602 326 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 HYPMO75409 117 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 GCGP01275 180 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGHV3-48P01763 117 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 FABP1P07148 127 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR10J4P0C629 311 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 ORM2P19652 201 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 PRTN3P24158 256 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 CNTFRP26992 372 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 GPR6P46095 362 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 MFAP2P55001 183 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 YPEL3P61236 119 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 UBE2L3P68036 154 aaKnown RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 RPL19P84098 196 aaKnown RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF90Q03938 601 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 PRB3Q04118 309 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 LY6DQ14210 128 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 PLGLAQ15195 96 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 RPEL1Q2QD12 228 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 COX19Q49B96 90 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 PDZD11Q5EBL8 140 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 COA6Q5JTJ3 125 aaKnown RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 DNLZQ5SXM8 178 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 C11orf71Q6IPW1 123 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 HCP5Q6MZN7 132 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 LINC00305Q7Z4B0 112 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 SH2D6Q7Z4S9 175 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 TMEM183AQ8IXX5 376 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 NPBQ8NG41 125 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR5AU1Q8NGC0 362 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR1L6Q8NGR2 347 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR1B1Q8NGR6 318 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 SRSF12Q8WXF0 261 aaKnown RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 CHRDL1Q9BU40 450 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 VCX2Q9H322 139 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 FBXL15Q9H469 300 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 PRORYQ9H606 182 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 OSTCQ9NRP0 149 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 ZNF355PQ9NSJ1 428 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 MRPL36Q9P0J6 103 aaKnown RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 TRAPPC1Q9Y5R8 145 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 F11RQ9Y624 299 aaKnown RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 CHD3Q12873 2000 aaKnown RBP2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 CNTRLQ7Z7A1 2325 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 BDP1A6H8Y1 2624 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 DYSFO75923 2080 aa2.64□□□□□ -1.99
HMGB3P11-201ENST00000440127 TRAV30A0A087WSZ9 112 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 TRBV9A0A0B4J1U6 114 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGHV3-21A0A0B4J1V1 117 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 A0A1B0GVY2 172 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 FBLL1A6NHQ2 334 aaKnown RBP2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 ODF3BA8MYP8 253 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 OOSP1A8MZH6 123 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 GGTLC3B5MD39 225 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 I3L2K1 104 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 K7EN84 100 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 SLC17A3O00476 420 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 ISLRO14498 428 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 NBR2O15453 112 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 LY6HO94772 140 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 CNIH1O95406 144 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 MOSP00540 346 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGLV2-8P01709 118 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 NBEAP1P0C6P0 100 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 APELAP0DMC3 54 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 PYYP10082 97 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 MGST1P10620 155 aaKnown RBP2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 FABP4P15090 132 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 MYCNOSP40205 109 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 XGP55808 180 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 DLX1P56177 255 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 PLP1P60201 277 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 OR5I1Q13606 314 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 HES1Q14469 280 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 FXYD3Q14802 87 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 MMDQ15546 238 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 CENPWQ5EE01 88 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 PYY3Q5JQD4 70 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 MINOS1Q5TGZ0 78 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 FAM231DQ6ZW35 169 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 KIR3DL3Q8N743 410 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 FXYD5Q96DB9 178 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGF2BP2-AS1Q96M15 143 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 PACRGQ96M98 296 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 HIST1H2BLQ99880 126 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 HIGD1AQ9Y241 93 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 HILPDAQ9Y5L2 63 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 MINOS1-NBL1R4GNA1 71 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 V9GYV3 84 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 RAI1Q7Z5J4 1906 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 CACNA1GO43497 2377 aa2.63□□□□□ -1.99
HMGB3P11-201ENST00000440127 KIAA2026Q5HYC2 2103 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 INTS1Q8N201 2190 aaKnown RBP2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGLV7-46A0A075B6I9 117 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 IGHV4-4A0A075B6R2 117 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 A0A087WW49 117 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 A0A1W2PRD5 423 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 A0A1W2PRF3 423 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 A0A1W2PRM7 423 aa2.62□□□□□ -1.99
HMGB3P11-201ENST00000440127 SMIM27A0A1W2PRY6 76 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms