RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 RSG1Q9BU20 258 aa10.39□□□□□ -0.75
RAB1A-201ENST00000398529 ARL6Q9H0F7 186 aa10.39□□□□□ -0.75
RAB1A-201ENST00000398529 KCNIP2Q9NS61 270 aa10.39□□□□□ -0.75
RAB1A-201ENST00000398529 SLC39A9Q9NUM3 307 aa10.39□□□□□ -0.75
RAB1A-201ENST00000398529 VPS13DQ5THJ4 4388 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 IGHV3-66A0A0C4DH42 116 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 HYPMO75409 117 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 OR5G3P0C626 314 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 LGALSLQ3ZCW2 172 aaPredicted RBP10.38□□□□□ -0.75
RAB1A-201ENST00000398529 PATE2Q6UY27 113 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 Q6ZRG5 221 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 TMUB2Q71RG4 321 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 HSD17B11Q8NBQ5 300 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 CYTL1Q9NRR1 136 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 PFDN2Q9UHV9 154 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 HIGD1AQ9Y241 93 aa10.38□□□□□ -0.75
RAB1A-201ENST00000398529 DNAH6Q9C0G6 4158 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 DEFB131BA0A096LNP1 70 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 A0A1B0GVY2 172 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 KANTRA0A1W2PQU2 76 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 BUB3O43684 328 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 RBMY1A1P0DJD3 496 aaKnown RBP10.37□□□□□ -0.75
RAB1A-201ENST00000398529 RBMY1CP0DJD4 496 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
RAB1A-201ENST00000398529 SOHLH1Q5JUK2 328 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 C16orf54Q6UWD8 224 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 PPP1R14BQ96C90 147 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 GRAMD2BQ96HH9 432 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 TIMM9Q9Y5J7 89 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 RFNGQ9Y644 331 aa10.37□□□□□ -0.75
RAB1A-201ENST00000398529 H3BRN7 92 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 M0R2N4 97 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 BCL2L11O43521 198 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 COX7A2P2O60397 106 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 PFDN1O60925 122 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 ATP6V0CP27449 155 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 S100A7P31151 101 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 C10orf113Q5VZT2 155 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 TMEM37Q8WXS4 190 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 PFDN5Q99471 154 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 SHANK2-AS3Q9BTD1 123 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 SLC25A39Q9BZJ4 359 aaPredicted RBP10.36□□□□□ -0.75
RAB1A-201ENST00000398529 ARV1Q9H2C2 271 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 DNAJC4Q9NNZ3 241 aa10.36□□□□□ -0.75
RAB1A-201ENST00000398529 ELOA3CA0A087WX78 387 aaPredicted RBP10.35□□□□□ -0.75
RAB1A-201ENST00000398529 ZNF98A6NK75 572 aa10.35□□□□□ -0.75
RAB1A-201ENST00000398529 AMBPP02760 352 aa10.35□□□□□ -0.75
RAB1A-201ENST00000398529 FFAR4Q5NUL3 377 aa10.35□□□□□ -0.75
RAB1A-201ENST00000398529 S100A7AQ86SG5 101 aa10.35□□□□□ -0.75
RAB1A-201ENST00000398529 UBE2DNLQ8IWF7 75 aa10.35□□□□□ -0.75
RAB1A-201ENST00000398529 STXBP6Q8NFX7 210 aa10.35□□□□□ -0.75
RAB1A-201ENST00000398529 GLMPQ8WWB7 406 aa10.35□□□□□ -0.75
RAB1A-201ENST00000398529 UHRF2Q96PU4 802 aa10.35□□□□□ -0.75
RAB1A-201ENST00000398529 PSMG3Q9BT73 122 aaPredicted RBP10.35□□□□□ -0.75
RAB1A-201ENST00000398529 AGRNO00468 2067 aa10.35□□□□□ -0.75
RAB1A-201ENST00000398529 ZNF705EA8MWA4 302 aaPredicted RBP10.34□□□□□ -0.75
RAB1A-201ENST00000398529 NUTF2P61970 127 aaKnown RBP10.34□□□□□ -0.75
RAB1A-201ENST00000398529 GCSAMLQ5JQS6 135 aa10.34□□□□□ -0.75
RAB1A-201ENST00000398529 C1orf194Q5T5A4 169 aa10.34□□□□□ -0.75
RAB1A-201ENST00000398529 LINC00305Q7Z4B0 112 aa10.34□□□□□ -0.75
RAB1A-201ENST00000398529 TRPT1Q86TN4 253 aaKnown RBP10.34□□□□□ -0.75
RAB1A-201ENST00000398529 C9orf62Q8N4C0 152 aa10.34□□□□□ -0.75
RAB1A-201ENST00000398529 GNPNAT1Q96EK6 184 aaPredicted RBP10.34□□□□□ -0.75
RAB1A-201ENST00000398529 SCRT1Q9BWW7 348 aa10.34□□□□□ -0.75
RAB1A-201ENST00000398529 ZNF471Q9BX82 626 aaPredicted RBP10.34□□□□□ -0.75
RAB1A-201ENST00000398529 C1QTNF4Q9BXJ3 329 aa10.34□□□□□ -0.75
RAB1A-201ENST00000398529 HELTA6NFD8 242 aa10.33□□□□□ -0.76
RAB1A-201ENST00000398529 LGALS9BQ3B8N2 356 aa10.33□□□□□ -0.76
RAB1A-201ENST00000398529 ACTL10Q5JWF8 245 aa10.33□□□□□ -0.76
RAB1A-201ENST00000398529 SIGLEC15Q6ZMC9 328 aa10.33□□□□□ -0.76
RAB1A-201ENST00000398529 OR8I2Q8N0Y5 310 aa10.33□□□□□ -0.76
RAB1A-201ENST00000398529 OR2G3Q8NGZ4 309 aa10.33□□□□□ -0.76
RAB1A-201ENST00000398529 SH3BGRL3Q9H299 93 aa10.33□□□□□ -0.76
RAB1A-201ENST00000398529 SLC25A22Q9H936 323 aa10.33□□□□□ -0.76
RAB1A-201ENST00000398529 RNF24Q9Y225 148 aa10.33□□□□□ -0.76
RAB1A-201ENST00000398529 RTL8CO15255 209 aa10.32□□□□□ -0.76
RAB1A-201ENST00000398529 ZNF688P0C7X2 276 aa10.32□□□□□ -0.76
RAB1A-201ENST00000398529 NKX2-5P52952 324 aaPredicted RBP10.32□□□□□ -0.76
RAB1A-201ENST00000398529 EIF5AP63241 154 aaKnown RBP10.32□□□□□ -0.76
RAB1A-201ENST00000398529 SERF2P84101 59 aa10.32□□□□□ -0.76
RAB1A-201ENST00000398529 ACOT6Q3I5F7 207 aaPredicted RBP10.32□□□□□ -0.76
RAB1A-201ENST00000398529 MORN5Q5VZ52 161 aa10.32□□□□□ -0.76
RAB1A-201ENST00000398529 FAM24BQ8N5W8 94 aa10.32□□□□□ -0.76
RAB1A-201ENST00000398529 SLC25A32Q9H2D1 315 aa10.32□□□□□ -0.76
RAB1A-201ENST00000398529 CLEC5AQ9NY25 188 aa10.32□□□□□ -0.76
RAB1A-201ENST00000398529 X6R8D5 127 aa10.32□□□□□ -0.76
RAB1A-201ENST00000398529 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
RAB1A-201ENST00000398529 K7EQG2 157 aa10.31□□□□□ -0.76
RAB1A-201ENST00000398529 M6PRP20645 277 aa10.31□□□□□ -0.76
RAB1A-201ENST00000398529 C4BPBP20851 252 aa10.31□□□□□ -0.76
RAB1A-201ENST00000398529 C12orf74Q32Q52 190 aa10.31□□□□□ -0.76
RAB1A-201ENST00000398529 FAM78BQ5VT40 261 aa10.31□□□□□ -0.76
RAB1A-201ENST00000398529 ZNF767PQ75MW2 155 aa10.31□□□□□ -0.76
RAB1A-201ENST00000398529 GPR82Q96P67 336 aa10.31□□□□□ -0.76
RAB1A-201ENST00000398529 MRPL32Q9BYC8 188 aaKnown RBP10.31□□□□□ -0.76
RAB1A-201ENST00000398529 PKHD1P08F94 4074 aa10.31□□□□□ -0.76
RAB1A-201ENST00000398529 TRAV5A0A0B4J249 113 aa10.3□□□□□ -0.76
RAB1A-201ENST00000398529 GIG44P09565 113 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms