RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ID1P41134 155 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 GALR1P47211 349 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 SULT1A1P50225 295 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 DEFA1P59665 94 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 DEFA3P59666 94 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 RRAS2P62070 204 aaPredicted RBP5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 VAMP2P63027 116 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 CYCSP99999 105 aaKnown RBP5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 SLC38A11Q08AI6 406 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 ACTL10Q5JWF8 245 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 ZFAND6Q6FIF0 208 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 FOXI2Q6ZQN5 318 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 S100A7AQ86SG5 101 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 ZNF546Q86UE3 836 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 TMEM217Q8N7C4 229 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 Q8NAQ8 132 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 OR11H2Q8NH07 326 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 TMEM37Q8WXS4 190 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 C20orf173Q96LM9 149 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 NEU1Q99519 415 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 HRH4Q9H3N8 390 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 RNF24Q9Y225 148 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 HIGD1AQ9Y241 93 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 LSM5Q9Y4Y9 91 aaKnown RBP5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 X6R8D5 127 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 VPS13DQ5THJ4 4388 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 ELOA3CA0A087WX78 387 aaPredicted RBP5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 TRAV8-2A0A0B4J237 113 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 A0A0J9YX75 114 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 IGSF23A1L1A6 192 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 SMCO3A2RU48 225 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 CST7O76096 145 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 MIFP14174 115 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 RPL7P18124 248 aaKnown RBP5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 RPL29P47914 159 aaKnown RBP5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 H2BFSP57053 126 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 RAP2BP61225 183 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 NUTF2P61970 127 aaKnown RBP5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 GDF5OSQ5U4N7 250 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 ZNF705AQ6ZN79 300 aaPredicted RBP5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 ZNF709Q8N972 641 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 RSG1Q9BU20 258 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 RNF126Q9BV68 326 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 SCRT1Q9BWW7 348 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 C1QTNF4Q9BXJ3 329 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 ARL6Q9H0F7 186 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 ARV1Q9H2C2 271 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 UQCC1Q9NVA1 299 aa5.93□□□□□ -1.46
HDGFL3-205ENST00000568129 ZNF705FA8MVS1 300 aaPredicted RBP5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 E5RGE8 158 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 GOSR2O14653 212 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 MPDU1O75352 247 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 SIX6O95475 246 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 ZNF705DP0CH99 300 aaPredicted RBP5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 ZNF705BP0CI00 300 aaPredicted RBP5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 RBMY1A1P0DJD3 496 aaKnown RBP5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 RBMY1CP0DJD4 496 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 CXCL2P19875 107 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 CAV2P51636 162 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 HBG1P69891 147 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 HBG2P69892 147 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 RAB31Q13636 194 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 RBMY1FQ15415 496 aaKnown RBP5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 CEMP1Q6PRD7 247 aaPredicted RBP5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 AMTNQ6UX39 209 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 PPP1R14BQ96C90 147 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 UHRF2Q96PU4 802 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 SLC25A22Q9H936 323 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 DNAJC4Q9NNZ3 241 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 RPRMQ9NS64 109 aa5.92□□□□□ -1.46
HDGFL3-205ENST00000568129 NUPR2A6NF83 97 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 SMIM9A6NGZ8 99 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 RLN2P04090 185 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 OR5G3P0C626 314 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 IGLC2P0DOY2 106 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 CXCL3P19876 107 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 CAMLGP49069 296 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 BCAP31P51572 246 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 DEFB1P60022 68 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 NHLH2Q02577 135 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 BAXQ07812 192 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 OPCMLQ14982 345 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 LINC00305Q7Z4B0 112 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 STX12Q86Y82 276 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 SAT2Q96F10 170 aaPredicted RBP5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 C16orf92Q96LL3 132 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 LINC00052Q96N35 136 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 SLC25A31Q9H0C2 315 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 OR5AC2Q9NZP5 309 aa5.91□□□□□ -1.46
HDGFL3-205ENST00000568129 IGHV4-28A0A0C4DH34 117 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 ZNF253O75346 499 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 MPC2O95563 127 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 PTTG1O95997 202 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 S100A10P60903 97 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 PSG9Q00887 426 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 PSG3Q16557 428 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 FAM78BQ5VT40 261 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 MORN5Q5VZ52 161 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 C10orf113Q5VZT2 155 aa5.9□□□□□ -1.46
HDGFL3-205ENST00000568129 MIC13Q5XKP0 118 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms