RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 MED31Q9Y3C7 131 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 KIF1BO60333 1816 aa2.09□□□□□ -2.08
HERPUD1-211ENST00000566550 ATAD5Q96QE3 1844 aa2.09□□□□□ -2.08
HERPUD1-211ENST00000566550 CCDC171Q6TFL3 1326 aa2.09□□□□□ -2.08
HERPUD1-211ENST00000566550 ALPK3Q96L96 1907 aa2.09□□□□□ -2.08
HERPUD1-211ENST00000566550 TOGARAM1Q9Y4F4 1720 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 MRC1P22897 1456 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 IGLV3-16A0A075B6K0 115 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 A0A1B0GV90 55 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 CCDC160A6NGH7 325 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 RFPL4AA6NLU0 287 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 C16orf90A8MZG2 172 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 RFPL4AL1F8VTS6 287 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 GABARAPH6UMI1 98 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 H7BYZ3 331 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 CREBL2O60519 120 aaPredicted RBP2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 CDS2O95674 445 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 TRGC2P03986 189 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 UBBP0CG47 229 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 MUC1P15941 1255 aaPredicted RBP2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 SDC4P31431 198 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 TMBIM6P55061 237 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 SPANXN3Q5MJ09 141 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 TMEM69Q5SWH9 247 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 SPINK14Q6IE38 97 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 RPL13AP3Q6NVV1 102 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 C2orf91Q6ZV80 131 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 MSRB3Q8IXL7 192 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 OR51T1Q8NGJ9 327 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 OR4C16Q8NGL9 310 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 WFDC5Q8TCV5 224 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 SLAMF6Q96DU3 332 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 AP1S3Q96PC3 154 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 UPK3BQ9BT76 320 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 SMIM3Q9BZL3 60 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 YIPF3Q9GZM5 350 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 SMDT1Q9H4I9 107 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 NAT8BQ9UHF3 227 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 TP53TG3Q9ULZ0 132 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 THADAQ6YHU6 1953 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 PTPRJQ12913 1337 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 CFAP46Q8IYW2 2715 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 DOT1LQ8TEK3 1739 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 SPTAN1Q13813 2472 aaKnown RBP2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 SPEGQ15772 3267 aa2.08□□□□□ -2.08
HERPUD1-211ENST00000566550 COL1A1P02452 1464 aaPredicted RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 RIF1Q5UIP0 2472 aaKnown RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 BORCS7-ASMTA0A0B4J1R7 106 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 TRDV1A0A1B0GX56 115 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 A0A1W2PQD3 144 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 C17orf98A8MV24 154 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 C9JAW5 83 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 TMEM256-PLSCR3K7ERE1 68 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 UBFD1O14562 309 aaKnown RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 TNFSF15O95150 251 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 NAPSAO96009 420 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 IGHV3-7P01780 117 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 CXCL1P09341 107 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 LGALS3P17931 250 aaKnown RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 GPX2P18283 190 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 FKBP2P26885 142 aaKnown RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 EVX1P49640 407 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 YPEL3P61236 119 aaPredicted RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 HIST1H4AP62805 103 aaKnown RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 RHOGP84095 191 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 SLC38A11Q08AI6 406 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 LINC01554Q52M75 96 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 OR8I2Q8N0Y5 310 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 APCDD1LQ8NCL9 501 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 OR5A1Q8NGJ0 315 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 OR2T10Q8NGZ9 312 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 KLF14Q8TD94 323 aaPredicted RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 TEX37Q96LM6 180 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 CGREF1Q99674 301 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 SLC25A21Q9BQT8 299 aaPredicted RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 OTORQ9NRC9 128 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 HIGD1AQ9Y241 93 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 ZNF443Q9Y2A4 671 aaPredicted RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 RBM7Q9Y580 266 aaKnown RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 S4R3C0 116 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 U3KQ87 197 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 COL5A3P25940 1745 aaPredicted RBP2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 PPLO60437 1756 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 ZNF407Q9C0G0 2248 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 RFX7Q2KHR2 1363 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 PLXND1Q9Y4D7 1925 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 MYH10P35580 1976 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 NOTCH2Q04721 2471 aa2.07□□□□□ -2.08
HERPUD1-211ENST00000566550 COL4A4P53420 1690 aaPredicted RBP2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 A0A0G2JMZ2 1700 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 FBN2P35556 2912 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 MYO15AQ9UKN7 3530 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 GVINP1Q7Z2Y8 2422 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 ZNF106Q9H2Y7 1883 aaKnown RBP2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 A0A087X0T9 212 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 A0A1B0GX51 115 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 IRGMA1A4Y4 181 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 TLCD2A6NGC4 264 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 C5orf58C9J3I9 102 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 M0R2Z0 102 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms