RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 WDR61Q9GZS3 305 aaKnown RBP7.61□□□□□ -1.19
SHMT2-224ENST00000556737 SLC25A32Q9H2D1 315 aa7.61□□□□□ -1.19
SHMT2-224ENST00000556737 NPVFQ9HCQ7 196 aa7.61□□□□□ -1.19
SHMT2-224ENST00000556737 TP53TG1Q9Y2A0 90 aa7.61□□□□□ -1.19
SHMT2-224ENST00000556737 IGKV1D-37A0A075B6S9 117 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 LCE6AA0A183 80 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 PRSS46E5RG02 174 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 UBE2CO00762 179 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 TOMM40O96008 361 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 CFDP00746 253 aaPredicted RBP7.6□□□□□ -1.19
SHMT2-224ENST00000556737 CD5P06127 495 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 NPPCP23582 126 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 ATP6V0CP27449 155 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 CAMLGP49069 296 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 TEPPQ6URK8 271 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 TEX261Q6UWH6 196 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 TMEM182Q6ZP80 229 aaPredicted RBP7.6□□□□□ -1.19
SHMT2-224ENST00000556737 OR2G3Q8NGZ4 309 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 DCANP1Q8TF63 244 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 GLMPQ8WWB7 406 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 GNPNAT1Q96EK6 184 aaPredicted RBP7.6□□□□□ -1.19
SHMT2-224ENST00000556737 RSG1Q9BU20 258 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 SH3BGRL3Q9H299 93 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 TMEM231Q9H6L2 316 aa7.6□□□□□ -1.19
SHMT2-224ENST00000556737 K7EQG2 157 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 SPRY2O43597 315 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 IL4P05112 153 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 RAB14P61106 215 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 GAMTQ14353 236 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 VWC2Q2TAL6 325 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 FAM74A1Q5RGS3 127 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 AKR1C8PQ5T2L2 129 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 ZNF767PQ75MW2 155 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 ZNF680Q8NEM1 530 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 RNF183Q96D59 192 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 NPCDR1Q9BY65 106 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 KCNIP2Q9NS61 270 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 WDR83OSQ9Y284 106 aa7.59□□□□□ -1.19
SHMT2-224ENST00000556737 A0A0J9YWU9 116 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 A0A1W2PS18 150 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 FNDC10F2Z333 226 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 AGPAT2O15120 278 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 MPDU1O75352 247 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 PSG1P11464 419 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 CMC4P56277 68 aaPredicted RBP7.58□□□□□ -1.2
SHMT2-224ENST00000556737 DEFB131AP59861 70 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 PAFAH1B2P68402 229 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 IFITM2Q01629 132 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 FFAR4Q5NUL3 377 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 LEMD1Q68G75 181 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 C16orf54Q6UWD8 224 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 TMEM144Q7Z5S9 345 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 STPG3Q8N7X2 389 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 STXBP6Q8NFX7 210 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 Q8WTZ3 238 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 PHYHIPLQ96FC7 376 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 MGST2Q99735 147 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 PARD6GQ9BYG4 376 aaPredicted RBP7.58□□□□□ -1.2
SHMT2-224ENST00000556737 RABAC1Q9UI14 185 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 RFNGQ9Y644 331 aa7.58□□□□□ -1.2
SHMT2-224ENST00000556737 IGKV1OR2-108A0A075B7D4 117 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 DNASE2O00115 360 aaPredicted RBP7.57□□□□□ -1.2
SHMT2-224ENST00000556737 FABP1P07148 127 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 SEC11BP0C7V7 166 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 ZNF688P0C7X2 276 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 SPP1P10451 314 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 RPL11P62913 178 aaKnown RBP7.57□□□□□ -1.2
SHMT2-224ENST00000556737 ZNF90Q03938 601 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 MIC13Q5XKP0 118 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 CYP2G1PQ6ZSU1 146 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 TRPT1Q86TN4 253 aaKnown RBP7.57□□□□□ -1.2
SHMT2-224ENST00000556737 THAP8Q8NA92 274 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 BPIFCQ8NFQ6 507 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 IL17DQ8TAD2 202 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 PCNPQ8WW12 178 aaKnown RBP7.57□□□□□ -1.2
SHMT2-224ENST00000556737 GRAMD2BQ96HH9 432 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 PSMG3Q9BT73 122 aaPredicted RBP7.57□□□□□ -1.2
SHMT2-224ENST00000556737 ARV1Q9H2C2 271 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 TIMM9Q9Y5J7 89 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 PXMP4Q9Y6I8 212 aa7.57□□□□□ -1.2
SHMT2-224ENST00000556737 BIRC6Q9NR09 4857 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 ZNF705EA8MWA4 302 aaPredicted RBP7.56□□□□□ -1.2
SHMT2-224ENST00000556737 BUB3O43684 328 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 RD3LP0DJH9 198 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 B2MP61769 119 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 ACOT6Q3I5F7 207 aaPredicted RBP7.56□□□□□ -1.2
SHMT2-224ENST00000556737 Q6ZRG5 221 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 OR51G1Q8NGK1 321 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 FAM213BQ8TBF2 198 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 RNF141Q8WVD5 230 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 RNF125Q96EQ8 232 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 NARS2Q96I59 477 aaKnown RBP7.56□□□□□ -1.2
SHMT2-224ENST00000556737 PBDC1Q9BVG4 233 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 CSTL1Q9H114 145 aa7.56□□□□□ -1.2
SHMT2-224ENST00000556737 HELTA6NFD8 242 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 CA1P00915 261 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-224ENST00000556737 MBP02144 154 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 GIG44P09565 113 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-224ENST00000556737 LINC00869P0C866 280 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 ATF4P18848 351 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms