RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 TMEM256Q8N2U0 113 aa6.4□□□□□ -1.38
NEDD8-207ENST00000533242 EAF1Q96JC9 268 aaPredicted RBP6.4□□□□□ -1.38
NEDD8-207ENST00000533242 FAM167A-AS1Q96KT0 104 aa6.4□□□□□ -1.38
NEDD8-207ENST00000533242 IMMP2LQ96T52 175 aa6.4□□□□□ -1.38
NEDD8-207ENST00000533242 COMMD5Q9GZQ3 224 aa6.4□□□□□ -1.38
NEDD8-207ENST00000533242 DNAH9Q9NYC9 4486 aa6.4□□□□□ -1.39
NEDD8-207ENST00000533242 A0A1W2PPI3 338 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 FNDC10F2Z333 226 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 OR7C2O60412 319 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 OR5G3P0C626 314 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 GZMBP10144 247 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 MFAP2P55001 183 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 RAB31Q13636 194 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 TMEM30BQ3MIR4 351 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 KHDC1LQ5JSQ8 128 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 PATE2Q6UY27 113 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 TMEM167AQ8TBQ9 72 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 ZNF596Q8TC21 504 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 LINC00479Q96M42 142 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 PRO1933Q9H354 126 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 HILPDAQ9Y5L2 63 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 PYYP10082 97 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 AREGP15514 252 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 CBLN1P23435 193 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 ADMP35318 185 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 CENPWQ5EE01 88 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 OR10G8Q8NGN5 311 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 NPIPB3Q92617 1050 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 SLC25A33Q9BSK2 321 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 SLC25A2Q9BXI2 301 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 RNASE7Q9H1E1 156 aaKnown RBP6.39□□□□□ -1.39
NEDD8-207ENST00000533242 TP53TG3Q9ULZ0 132 aa6.39□□□□□ -1.39
NEDD8-207ENST00000533242 IGHV3-21A0A0B4J1V1 117 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 GRIFINA4D1Z8 144 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 IGLV2-8P01709 118 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 MYCNOSP40205 109 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 ZNF137PP52743 207 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 LINC00310P59036 64 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 SUMO1P63165 101 aaKnown RBP6.38□□□□□ -1.39
NEDD8-207ENST00000533242 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
NEDD8-207ENST00000533242 KCNIP4Q6PIL6 250 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 C10orf99Q6UWK7 81 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 PQLC2Q6ZP29 291 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 TGIF2LXQ8IUE1 241 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 TXNDC17Q9BRA2 123 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 FKBP11Q9NYL4 201 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 TRAPPC1Q9Y5R8 145 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 V9GYV3 84 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 A0A087X0M5 115 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 IGHV2-26A0A0B4J1V2 119 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 A0A1B0GX30 115 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 IGLC7A0M8Q6 106 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 BRS3P32247 399 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 CNN1P51911 297 aaKnown RBP6.38□□□□□ -1.39
NEDD8-207ENST00000533242 FXYD3Q14802 87 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 PDPNQ86YL7 162 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 LINC00311Q8N616 119 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 NHLRC2Q8NBF2 726 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 SLC35E1Q96K37 410 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 RBM14Q96PK6 669 aaKnown RBP6.38□□□□□ -1.39
NEDD8-207ENST00000533242 CLEC7AQ9BXN2 247 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 WASHC3Q9Y3C0 194 aa6.38□□□□□ -1.39
NEDD8-207ENST00000533242 C9JCJ5 164 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 F2Z2F3 143 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 SPINK4O60575 86 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 MOSP00540 346 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 HTR1DP28221 377 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 SLC35B1P78383 322 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 JOSD1Q15040 202 aaPredicted RBP6.37□□□□□ -1.39
NEDD8-207ENST00000533242 MUC7Q8TAX7 377 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 PFDN5Q99471 154 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 TMEM133Q9H2Q1 129 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 TECRQ9NZ01 308 aaKnown RBP6.37□□□□□ -1.39
NEDD8-207ENST00000533242 HELTA6NFD8 242 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 INS-IGF2F8WCM5 200 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 M0QZK8 103 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 CA1P00915 261 aaPredicted RBP6.37□□□□□ -1.39
NEDD8-207ENST00000533242 IGLV1-47P01700 117 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 C8orf88P0DMB2 117 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 ERHP84090 104 aaKnown RBP6.37□□□□□ -1.39
NEDD8-207ENST00000533242 CASC10Q5T4H9 136 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 RNASEH2CQ8TDP1 164 aaKnown RBP6.37□□□□□ -1.39
NEDD8-207ENST00000533242 IGF2BP2-AS1Q96M15 143 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 ZNF355PQ9NSJ1 428 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 IL36BQ9NZH7 164 aa6.37□□□□□ -1.39
NEDD8-207ENST00000533242 AMY1AP04745 511 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 GNG4P50150 75 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 TCL1AP56279 114 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 ERVFC1-1P60608 527 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 YPEL3P61236 119 aaPredicted RBP6.36□□□□□ -1.39
NEDD8-207ENST00000533242 UBE2L3P68036 154 aaKnown RBP6.36□□□□□ -1.39
NEDD8-207ENST00000533242 MMD2Q8IY49 270 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 OR8I2Q8N0Y5 310 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 GBGT1Q8N5D6 347 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 C8orf31Q8N9H6 132 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 CACNG8Q8WXS5 425 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 DNAJC4Q9NNZ3 241 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 TMEM167BQ9NRX6 74 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 DPM3Q9P2X0 92 aa6.36□□□□□ -1.39
NEDD8-207ENST00000533242 TRAV34A0A0B4J273 112 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms