RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 STXBP6Q8NFX7 210 aa11.33□□□□□ -0.6
NUP50-219ENST00000497960 SCGB1C1Q8TD33 95 aa11.33□□□□□ -0.6
NUP50-219ENST00000497960 MFFQ9GZY8 342 aa11.33□□□□□ -0.6
NUP50-219ENST00000497960 SLC45A2Q9UMX9 530 aa11.33□□□□□ -0.6
NUP50-219ENST00000497960 HELTA6NFD8 242 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 COX7A2P2O60397 106 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 OR5G3P0C626 314 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 S100A7P31151 101 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 B2MP61769 119 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 ZNF124Q15973 351 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 ARL6Q9H0F7 186 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 CSTL1Q9H114 145 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 WFDC1Q9HC57 220 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 HIGD1AQ9Y241 93 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 PXMP4Q9Y6I8 212 aa11.32□□□□□ -0.6
NUP50-219ENST00000497960 HYPMO75409 117 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 RPL29P47914 159 aaKnown RBP11.31□□□□□ -0.6
NUP50-219ENST00000497960 DEFB131AP59861 70 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 ZNF345Q14585 488 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 PXDC1Q5TGL8 231 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 Q6ZRG5 221 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 S100A7AQ86SG5 101 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 OR11H4Q8NGC9 324 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 RNF183Q96D59 192 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 RSG1Q9BU20 258 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 PARD6GQ9BYG4 376 aaPredicted RBP11.31□□□□□ -0.6
NUP50-219ENST00000497960 U3KQE9 123 aa11.31□□□□□ -0.6
NUP50-219ENST00000497960 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 H3BRN7 92 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 K7EQG2 157 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 PLP1P60201 277 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 PRR20EP86478 221 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 PRR20CP86479 221 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 PRR20DP86480 221 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 PRR20BP86481 221 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 PRR20AP86496 221 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 LEMD1Q68G75 181 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 SLC25A22Q9H936 323 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 SLC39A9Q9NUM3 307 aa11.3□□□□□ -0.6
NUP50-219ENST00000497960 BORCS7-ASMTA0A0B4J1R7 106 aa11.29□□□□□ -0.6
NUP50-219ENST00000497960 C1QBP02746 253 aa11.29□□□□□ -0.6
NUP50-219ENST00000497960 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
NUP50-219ENST00000497960 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
NUP50-219ENST00000497960 HSD17B11Q8NBQ5 300 aa11.29□□□□□ -0.6
NUP50-219ENST00000497960 OR1L4Q8NGR5 311 aa11.29□□□□□ -0.6
NUP50-219ENST00000497960 GLMPQ8WWB7 406 aa11.29□□□□□ -0.6
NUP50-219ENST00000497960 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
NUP50-219ENST00000497960 PFDN5Q99471 154 aa11.29□□□□□ -0.6
NUP50-219ENST00000497960 TAAR5O14804 337 aa11.28□□□□□ -0.6
NUP50-219ENST00000497960 BUB3O43684 328 aa11.28□□□□□ -0.6
NUP50-219ENST00000497960 CD300CQ08708 224 aa11.28□□□□□ -0.6
NUP50-219ENST00000497960 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
NUP50-219ENST00000497960 RPL7L1Q6DKI1 246 aaKnown RBP11.28□□□□□ -0.6
NUP50-219ENST00000497960 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
NUP50-219ENST00000497960 STHQ8IWL8 128 aa11.28□□□□□ -0.6
NUP50-219ENST00000497960 KCNRGQ8N5I3 272 aa11.28□□□□□ -0.6
NUP50-219ENST00000497960 ARPC5LQ9BPX5 153 aa11.28□□□□□ -0.6
NUP50-219ENST00000497960 SCRT1Q9BWW7 348 aa11.28□□□□□ -0.6
NUP50-219ENST00000497960 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
NUP50-219ENST00000497960 TENM2Q9NT68 2774 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 ELOA3CA0A087WX78 387 aaPredicted RBP11.27□□□□□ -0.61
NUP50-219ENST00000497960 A0A0D9SG52 128 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 A0A0J9YWU9 116 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 KANTRA0A1W2PQU2 76 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 ZNF98A6NK75 572 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 PFDN1O60925 122 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 ZNF688P0C7X2 276 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 ZFP69Q49AA0 526 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 FFAR4Q5NUL3 377 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 LINC00305Q7Z4B0 112 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 OR8I2Q8N0Y5 310 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 DCANP1Q8TF63 244 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.61
NUP50-219ENST00000497960 DNAH7Q8WXX0 4024 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 LCE6AA0A183 80 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 BCL2L11O43521 198 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 CXCL2P19875 107 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 C1orf194Q5T5A4 169 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 PATE2Q6UY27 113 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 HYLS1Q96M11 299 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 SLC25A32Q9H2D1 315 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 RNF24Q9Y225 148 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 TIMM9Q9Y5J7 89 aa11.26□□□□□ -0.61
NUP50-219ENST00000497960 JTBO76095 146 aa11.25□□□□□ -0.61
NUP50-219ENST00000497960 CA1P00915 261 aaPredicted RBP11.25□□□□□ -0.61
NUP50-219ENST00000497960 ATP6V0CP27449 155 aa11.25□□□□□ -0.61
NUP50-219ENST00000497960 GALR1P47211 349 aa11.25□□□□□ -0.61
NUP50-219ENST00000497960 SNRPD3P62318 126 aaKnown RBP11.25□□□□□ -0.61
NUP50-219ENST00000497960 GCSAMLQ5JQS6 135 aa11.25□□□□□ -0.61
NUP50-219ENST00000497960 TMEM37Q8WXS4 190 aa11.25□□□□□ -0.61
NUP50-219ENST00000497960 GPR82Q96P67 336 aa11.25□□□□□ -0.61
NUP50-219ENST00000497960 DNAJC4Q9NNZ3 241 aa11.25□□□□□ -0.61
NUP50-219ENST00000497960 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
NUP50-219ENST00000497960 ATF4P18848 351 aaPredicted RBP11.24□□□□□ -0.61
NUP50-219ENST00000497960 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
NUP50-219ENST00000497960 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
NUP50-219ENST00000497960 TMUB2Q71RG4 321 aa11.24□□□□□ -0.61
NUP50-219ENST00000497960 GNPNAT1Q96EK6 184 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms