RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	HMGB3	O15347	200 aa	Known RBP	5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	TGOLN2	O43493	480 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	CDC34	P49427	236 aa	Predicted RBP	5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	FGF8	P55075	233 aa	Predicted RBP	5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	PLP1	P60201	277 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	RHOB	P62745	196 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	FAM78B	Q5VT40	261 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	C10orf113	Q5VZT2	155 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	SPATA31B1P	Q5VZV4	182 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	SPSB3	Q6PJ21	355 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	LCN15	Q6UWW0	184 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	ZNF600	Q6ZNG1	722 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	MIR17HG	Q75NE6	70 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	OR9G4	Q8NGQ1	327 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	OR1L4	Q8NGR5	311 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	GATAD1	Q8WUU5	269 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	SFT2D1	Q8WV19	159 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	MBD3L1	Q8WWY6	194 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	TMEM37	Q8WXS4	190 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	RAB24	Q969Q5	203 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	ZNF414	Q96IQ9	312 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	PRR25	Q96S07	402 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	PBDC1	Q9BVG4	233 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	MAP1LC3B	Q9GZQ8	125 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	SEPSECS	Q9HD40	501 aa	Known RBP	5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	PEMT	Q9UBM1	199 aa		5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	PUS1	Q9Y606	427 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
ITSN1-223	ENST00000465143	IGHV3OR16-8	A0A075B7F1	116 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	TRAV1-1	A0A0B4J248	108 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	TRAV5	A0A0B4J249	113 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	BMPR1B	O00238	502 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	GGCT	O75223	188 aa	Known RBP	5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	OR2C1	O95371	312 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	HBE1	P02100	147 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	IL4	P05112	153 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	CCL20	P78556	96 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	REL	Q04864	619 aa	Predicted RBP	5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	KLF5	Q13887	457 aa	Predicted RBP	5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	NDUFA5	Q16718	116 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	MORN5	Q5VZ52	161 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	COMMD7	Q86VX2	200 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	SLC7A5P1	Q8MH63	180 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	LYPD6B	Q8NI32	183 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	RNF125	Q96EQ8	232 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	UHRF2	Q96PU4	802 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	PFDN5	Q99471	154 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	RNF2	Q99496	336 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	MRPL27	Q9P0M9	148 aa	Known RBP	5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	PFDN2	Q9UHV9	154 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	FUT9	Q9Y231	359 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	HIGD1A	Q9Y241	93 aa		5.83	□□□□□ -1.48
ITSN1-223	ENST00000465143	ZNF320	A2RRD8	509 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	STAG3L2	P0CL84	134 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	STAG3L3	P0CL85	134 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	ARL14EPL	P0DKL9	152 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	GP9	P14770	177 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	USF2	Q15853	346 aa	Predicted RBP	5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	LEMD1	Q68G75	181 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	TOMM20L	Q6UXN7	152 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	LINC00305	Q7Z4B0	112 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	DYNLRB2	Q8TF09	96 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	MARC2	Q969Z3	335 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	MRPL32	Q9BYC8	188 aa	Known RBP	5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	MED9	Q9NWA0	146 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	TECR	Q9NZ01	308 aa	Known RBP	5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	MEGF8	Q7Z7M0	2845 aa		5.82	□□□□□ -1.48
ITSN1-223	ENST00000465143	CMYA5	Q8N3K9	4069 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143		H3BRN7	92 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	NDUFA4	O00483	81 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	ZNF207	O43670	478 aa	Known RBP	5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	CXorf1	O96002	111 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	C8orf88	P0DMB2	117 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	GCHFR	P30047	84 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	TAS2R45	P59539	299 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	FAM106A	Q4KMX7	169 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	KHDC3L	Q587J8	217 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	IL34	Q6ZMJ4	242 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	IQCF2	Q8IXL9	164 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	FAM167A-AS1	Q96KT0	104 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	SHANK2-AS3	Q9BTD1	123 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	C20orf24	Q9BUV8	137 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	SCRT1	Q9BWW7	348 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	SLC25A2	Q9BXI2	301 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	TMPRSS5	Q9H3S3	457 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	GNG13	Q9P2W3	67 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	RABAC1	Q9UI14	185 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	SMAD5-AS1	Q9Y6J3	95 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	VWF	P04275	2813 aa		5.81	□□□□□ -1.48
ITSN1-223	ENST00000465143	PKD1L1	Q8TDX9	2849 aa		5.8	□□□□□ -1.48
ITSN1-223	ENST00000465143	ZNF98	A6NK75	572 aa		5.8	□□□□□ -1.48
ITSN1-223	ENST00000465143	KRTAP9-7	A8MTY7	169 aa		5.8	□□□□□ -1.48
ITSN1-223	ENST00000465143	OR7C2	O60412	319 aa		5.8	□□□□□ -1.48
ITSN1-223	ENST00000465143	CSN3	P07498	182 aa		5.8	□□□□□ -1.48
ITSN1-223	ENST00000465143	HAGH	Q16775	308 aa		5.8	□□□□□ -1.48
ITSN1-223	ENST00000465143	LCN12	Q6JVE5	192 aa		5.8	□□□□□ -1.48
ITSN1-223	ENST00000465143	UNQ9165/PRO28630	Q6UXU0	137 aa		5.8	□□□□□ -1.48
ITSN1-223	ENST00000465143	PQLC2	Q6ZP29	291 aa		5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms