RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 FOXI2Q6ZQN5 318 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 Q6ZTC4 211 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 C12orf45Q8N5I9 185 aaPredicted RBP7.01□□□□□ -1.29
USP54-207ENST00000451492 RNF182Q8N6D2 247 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 C1QTNF4Q9BXJ3 329 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 SLC25A39Q9BZJ4 359 aaPredicted RBP7.01□□□□□ -1.29
USP54-207ENST00000451492 RPRMQ9NS64 109 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 IGLL5B9A064 214 aa7□□□□□ -1.29
USP54-207ENST00000451492 ISLRO14498 428 aa7□□□□□ -1.29
USP54-207ENST00000451492 TSC22D2O75157 780 aa7□□□□□ -1.29
USP54-207ENST00000451492 HYPMO75409 117 aa7□□□□□ -1.29
USP54-207ENST00000451492 DEDDO75618 318 aa7□□□□□ -1.29
USP54-207ENST00000451492 CST7O76096 145 aa7□□□□□ -1.29
USP54-207ENST00000451492 ZNF705DP0CH99 300 aaPredicted RBP7□□□□□ -1.29
USP54-207ENST00000451492 ZNF705BP0CI00 300 aaPredicted RBP7□□□□□ -1.29
USP54-207ENST00000451492 HLA-DMBP28068 263 aa7□□□□□ -1.29
USP54-207ENST00000451492 MEOX2P50222 304 aa7□□□□□ -1.29
USP54-207ENST00000451492 EMP1P54849 157 aa7□□□□□ -1.29
USP54-207ENST00000451492 FAM78BQ5VT40 261 aa7□□□□□ -1.29
USP54-207ENST00000451492 MZT2BQ6NZ67 158 aa7□□□□□ -1.29
USP54-207ENST00000451492 TEPPQ6URK8 271 aa7□□□□□ -1.29
USP54-207ENST00000451492 CSNK1G2-AS1Q8NCQ2 148 aa7□□□□□ -1.29
USP54-207ENST00000451492 ENKURQ8TC29 256 aa7□□□□□ -1.29
USP54-207ENST00000451492 NPVFQ9HCQ7 196 aa7□□□□□ -1.29
USP54-207ENST00000451492 SEPSECSQ9HD40 501 aaKnown RBP7□□□□□ -1.29
USP54-207ENST00000451492 SLC45A2Q9UMX9 530 aa7□□□□□ -1.29
USP54-207ENST00000451492 A0A0J9YX75 114 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 FAM24AA6NFZ4 105 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 GOSR2O14653 212 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 ZNF709Q8N972 641 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 ZNF738Q8NE65 137 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 LRRC20Q8TCA0 184 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 C2CD4CQ8TF44 421 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 S100ZQ8WXG8 99 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 C17orf77Q96MU5 243 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 SHANK2-AS3Q9BTD1 123 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 ARV1Q9H2C2 271 aa6.99□□□□□ -1.29
USP54-207ENST00000451492 UBE2L5PA0A1B0GUS4 154 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 H3BTX0 84 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 M0R2Z0 102 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 AGPAT2O15120 278 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 COX7A2P2O60397 106 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 SIX6O95475 246 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 PVALBP20472 110 aaPredicted RBP6.98□□□□□ -1.29
USP54-207ENST00000451492 S100A7P31151 101 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 TAS2R30P59541 319 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 SELENOTP62341 195 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 PSG9Q00887 426 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 ASAH1Q13510 395 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 RAB32Q13637 225 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 PATE2Q6UY27 113 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 ZNF546Q86UE3 836 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 RPP25LQ8N5L8 163 aaKnown RBP6.98□□□□□ -1.29
USP54-207ENST00000451492 C2orf50Q96LR7 162 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 GPR82Q96P67 336 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 MGST2Q99735 147 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 FRAS1Q86XX4 4008 aa6.98□□□□□ -1.29
USP54-207ENST00000451492 TRAV8-2A0A0B4J237 113 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 TRAV10A0A0B4J240 114 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 IGSF23A1L1A6 192 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 UPK1BO75841 260 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 RPL7P18124 248 aaKnown RBP6.97□□□□□ -1.29
USP54-207ENST00000451492 HIST1H1AQ02539 215 aaPredicted RBP6.97□□□□□ -1.29
USP54-207ENST00000451492 BAXQ07812 192 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 SPINK13Q1W4C9 94 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 LRRC37A5PQ49AS3 106 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 SAMD13Q5VXD3 122 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 MIC13Q5XKP0 118 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 LINC00305Q7Z4B0 112 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 TMEM208Q9BTX3 173 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 GPN1Q9HCN4 374 aaPredicted RBP6.97□□□□□ -1.29
USP54-207ENST00000451492 PTTG2Q9NZH5 202 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 GOLT1BQ9Y3E0 138 aa6.97□□□□□ -1.29
USP54-207ENST00000451492 DNAH6Q9C0G6 4158 aa6.96□□□□□ -1.29
USP54-207ENST00000451492 IGHV4-4A0A075B6R2 117 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 TRAV12-2A0A075B6T6 113 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 C11orf94C9JXX5 98 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 FNDC10F2Z333 226 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 CAMLGP49069 296 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 CNN1P51911 297 aaKnown RBP6.96□□□□□ -1.3
USP54-207ENST00000451492 PLP1P60201 277 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 RHOBP62745 196 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 C12orf74Q32Q52 190 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 MORN5Q5VZ52 161 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 C10orf113Q5VZT2 155 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 SPATA31B1PQ5VZV4 182 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 ZNF705AQ6ZN79 300 aaPredicted RBP6.96□□□□□ -1.3
USP54-207ENST00000451492 NRARPQ7Z6K4 114 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 STX12Q86Y82 276 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 BAP18Q8IXM2 172 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 HRH4Q9H3N8 390 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 UQCC1Q9NVA1 299 aa6.96□□□□□ -1.3
USP54-207ENST00000451492 DEFB131BA0A096LNP1 70 aa6.95□□□□□ -1.3
USP54-207ENST00000451492 LOC102723971A0A1B0GUV8 181 aa6.95□□□□□ -1.3
USP54-207ENST00000451492 A6NHS1 94 aa6.95□□□□□ -1.3
USP54-207ENST00000451492 ZNF705FA8MVS1 300 aaPredicted RBP6.95□□□□□ -1.3
USP54-207ENST00000451492 INSP01308 110 aa6.95□□□□□ -1.3
USP54-207ENST00000451492 PRM2P04554 102 aa6.95□□□□□ -1.3
USP54-207ENST00000451492 HTN3P15516 51 aa6.95□□□□□ -1.3
USP54-207ENST00000451492 CXCL3P19876 107 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms