RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 HBG1P69891 147 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 HBG2P69892 147 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 OXA1LQ15070 435 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 PSMG4Q5JS54 123 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 MIC13Q5XKP0 118 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 OR5C1Q8NGR4 320 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 THAP6Q8TBB0 222 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 NRN1Q9NPD7 142 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 HIGD1AQ9Y241 93 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 WDR83OSQ9Y284 106 aa11.78□□□□□ -0.52
ITGB1-207ENST00000439974 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
ITGB1-207ENST00000439974 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.53
ITGB1-207ENST00000439974 H3BRN7 92 aa11.77□□□□□ -0.53
ITGB1-207ENST00000439974 CFDP00746 253 aaPredicted RBP11.77□□□□□ -0.53
ITGB1-207ENST00000439974 SELENOTP62341 195 aa11.77□□□□□ -0.53
ITGB1-207ENST00000439974 VWC2Q2TAL6 325 aa11.77□□□□□ -0.53
ITGB1-207ENST00000439974 ZNF546Q86UE3 836 aa11.77□□□□□ -0.53
ITGB1-207ENST00000439974 SLC25A39Q9BZJ4 359 aaPredicted RBP11.77□□□□□ -0.53
ITGB1-207ENST00000439974 SMIM3Q9BZL3 60 aa11.77□□□□□ -0.53
ITGB1-207ENST00000439974 SLC25A31Q9H0C2 315 aa11.77□□□□□ -0.53
ITGB1-207ENST00000439974 PFDN2Q9UHV9 154 aa11.77□□□□□ -0.53
ITGB1-207ENST00000439974 SNRPCP09234 159 aaKnown RBP11.76□□□□□ -0.53
ITGB1-207ENST00000439974 NUP62P37198 522 aaPredicted RBP11.76□□□□□ -0.53
ITGB1-207ENST00000439974 AP2S1P53680 142 aaPredicted RBP11.76□□□□□ -0.53
ITGB1-207ENST00000439974 RAP2BP61225 183 aa11.76□□□□□ -0.53
ITGB1-207ENST00000439974 Q5BKY6 102 aa11.76□□□□□ -0.53
ITGB1-207ENST00000439974 GATAD1Q8WUU5 269 aa11.76□□□□□ -0.53
ITGB1-207ENST00000439974 C17orf77Q96MU5 243 aa11.76□□□□□ -0.53
ITGB1-207ENST00000439974 SHANK2-AS3Q9BTD1 123 aa11.76□□□□□ -0.53
ITGB1-207ENST00000439974 RSG1Q9BU20 258 aa11.76□□□□□ -0.53
ITGB1-207ENST00000439974 PRB4P10163 310 aaPredicted RBP11.75□□□□□ -0.53
ITGB1-207ENST00000439974 PLP1P60201 277 aa11.75□□□□□ -0.53
ITGB1-207ENST00000439974 C1orf194Q5T5A4 169 aa11.75□□□□□ -0.53
ITGB1-207ENST00000439974 MORN5Q5VZ52 161 aa11.75□□□□□ -0.53
ITGB1-207ENST00000439974 IGFL4Q6B9Z1 124 aa11.75□□□□□ -0.53
ITGB1-207ENST00000439974 LINC00052Q96N35 136 aa11.75□□□□□ -0.53
ITGB1-207ENST00000439974 ARV1Q9H2C2 271 aa11.75□□□□□ -0.53
ITGB1-207ENST00000439974 AGRNO00468 2067 aa11.75□□□□□ -0.53
ITGB1-207ENST00000439974 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 PET100P0DJ07 73 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 RPL12P30050 165 aaKnown RBP11.74□□□□□ -0.53
ITGB1-207ENST00000439974 FGL1Q08830 312 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 RAB31Q13636 194 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 ATP6V1FQ16864 119 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 ACTL10Q5JWF8 245 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 TMEM37Q8WXS4 190 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 RARRES2Q99969 163 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 FBXL17Q9UF56 701 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 HSPB11Q9Y547 144 aa11.74□□□□□ -0.53
ITGB1-207ENST00000439974 FRAS1Q86XX4 4008 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 TRAV5A0A0B4J249 113 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 GALR1P47211 349 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 B2MP61769 119 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 PRR20EP86478 221 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 PRR20CP86479 221 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 PRR20DP86480 221 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 PRR20BP86481 221 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 PRR20AP86496 221 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 OPCMLQ14982 345 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 GCSAMLQ5JQS6 135 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 LINC00305Q7Z4B0 112 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 DNAH10Q8IVF4 4471 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 PHLDA1Q8WV24 401 aaPredicted RBP11.73□□□□□ -0.53
ITGB1-207ENST00000439974 C20orf173Q96LM9 149 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 WFDC1Q9HC57 220 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 PXMP4Q9Y6I8 212 aa11.73□□□□□ -0.53
ITGB1-207ENST00000439974 H3BTX0 84 aa11.72□□□□□ -0.53
ITGB1-207ENST00000439974 SOCS3O14543 225 aa11.72□□□□□ -0.53
ITGB1-207ENST00000439974 CA1P00915 261 aaPredicted RBP11.72□□□□□ -0.53
ITGB1-207ENST00000439974 C10orf113Q5VZT2 155 aa11.72□□□□□ -0.53
ITGB1-207ENST00000439974 STHQ8IWL8 128 aa11.72□□□□□ -0.53
ITGB1-207ENST00000439974 OR11H2Q8NH07 326 aa11.72□□□□□ -0.53
ITGB1-207ENST00000439974 NPCDR1Q9BY65 106 aa11.72□□□□□ -0.53
ITGB1-207ENST00000439974 C11orf68Q9H3H3 251 aaKnown RBP11.72□□□□□ -0.53
ITGB1-207ENST00000439974 SLC39A9Q9NUM3 307 aa11.72□□□□□ -0.53
ITGB1-207ENST00000439974 RFNGQ9Y644 331 aa11.72□□□□□ -0.53
ITGB1-207ENST00000439974 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.53
ITGB1-207ENST00000439974 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
ITGB1-207ENST00000439974 C16orf92Q96LL3 132 aa11.71□□□□□ -0.53
ITGB1-207ENST00000439974 ATP5SQ99766 215 aa11.71□□□□□ -0.53
ITGB1-207ENST00000439974 MFFQ9GZY8 342 aa11.71□□□□□ -0.53
ITGB1-207ENST00000439974 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
ITGB1-207ENST00000439974 F6UB75 175 aa11.7□□□□□ -0.54
ITGB1-207ENST00000439974 IGKV3-20P01619 116 aa11.7□□□□□ -0.54
ITGB1-207ENST00000439974 GIPP09681 153 aaPredicted RBP11.7□□□□□ -0.54
ITGB1-207ENST00000439974 HLA-DMBP28068 263 aa11.7□□□□□ -0.54
ITGB1-207ENST00000439974 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
ITGB1-207ENST00000439974 Q6ZRG5 221 aa11.7□□□□□ -0.54
ITGB1-207ENST00000439974 TRPT1Q86TN4 253 aaKnown RBP11.7□□□□□ -0.54
ITGB1-207ENST00000439974 RNF182Q8N6D2 247 aa11.7□□□□□ -0.54
ITGB1-207ENST00000439974 C11orf45Q8TAV5 145 aa11.7□□□□□ -0.54
ITGB1-207ENST00000439974 CHAC2Q8WUX2 184 aa11.7□□□□□ -0.54
ITGB1-207ENST00000439974 WDR61Q9GZS3 305 aaKnown RBP11.7□□□□□ -0.54
ITGB1-207ENST00000439974 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
ITGB1-207ENST00000439974 TRAV8-2A0A0B4J237 113 aa11.69□□□□□ -0.54
ITGB1-207ENST00000439974 SMLR1H3BR10 107 aa11.69□□□□□ -0.54
ITGB1-207ENST00000439974 ID1P41134 155 aa11.69□□□□□ -0.54
ITGB1-207ENST00000439974 PXDC1Q5TGL8 231 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms