RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 UHRF2Q96PU4 802 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 PFDN5Q99471 154 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 PBDC1Q9BVG4 233 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 C19orf24Q9BVV8 132 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 ACTR3CQ9C0K3 210 aaPredicted RBP5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 SLC25A22Q9H936 323 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 AURKAIP1Q9NWT8 199 aaPredicted RBP5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 FUT9Q9Y231 359 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 TSSC4Q9Y5U2 329 aaPredicted RBP5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 TLN2Q9Y4G6 2542 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 TRAV1-1A0A0B4J248 108 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 CTXND1A0A1B0GTU2 59 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 A0A1W2PPV4 95 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 ZNF320A2RRD8 509 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 ZNF207O43670 478 aaKnown RBP5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 APOHP02749 345 aaPredicted RBP5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 HOXD3P31249 432 aaPredicted RBP5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 PCP4P48539 62 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 CDC34P49427 236 aaPredicted RBP5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 RHOBP62745 196 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 BLOC1S1P78537 153 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 KLF5Q13887 457 aaPredicted RBP5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 LEMD1Q68G75 181 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 C16orf54Q6UWD8 224 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 LCN15Q6UWW0 184 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 LINC00305Q7Z4B0 112 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 SYT8Q8NBV8 401 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 OR11H1Q8NG94 326 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 LYPD6BQ8NI32 183 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 SFT2D1Q8WV19 159 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 TMEM190Q8WZ59 177 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 ZNF503Q96F45 646 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 FAM167A-AS1Q96KT0 104 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 SHANK2-AS3Q9BTD1 123 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 C20orf24Q9BUV8 137 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 SCRT1Q9BWW7 348 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 SLC25A2Q9BXI2 301 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 MRPL32Q9BYC8 188 aaKnown RBP5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 SLC25A39Q9BZJ4 359 aaPredicted RBP5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 HIGD1AQ9Y241 93 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 PLXNB1O43157 2135 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 F8P00451 2351 aa5.36□□□□□ -1.55
LSM3P3-201ENST00000436601 A0A1B0GV50 99 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 MAP1LC3B2A6NCE7 125 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 LINC01619G3V211 115 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 H3BRN7 92 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 TEX46H3BTG2 121 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 K7EMT4 169 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 LGALS9O00182 355 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 STAG3L2P0CL84 134 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 STAG3L3P0CL85 134 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 C8orf88P0DMB2 117 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 EDN2P20800 178 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 CRYBB3P26998 211 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 FGF8P55075 233 aaPredicted RBP5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 SYNJ2BPP57105 145 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 RAB14P61106 215 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 RPEL1Q2QD12 228 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 BEAN1Q3B7T3 259 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 FAM106AQ4KMX7 169 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 NDUFA11Q86Y39 141 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 DLX4Q92988 240 aaPredicted RBP5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 RNF2Q99496 336 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 CITED1Q99966 193 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 MAP1LC3BQ9GZQ8 125 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 HRH4Q9H3N8 390 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 TECRQ9NZ01 308 aaKnown RBP5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 RABAC1Q9UI14 185 aa5.35□□□□□ -1.55
LSM3P3-201ENST00000436601 NSD1Q96L73 2696 aaPredicted RBP5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 IGHV3OR16-13A0A075B7E8 117 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 IGHV3-49A0A0A0MS15 119 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 IGHV3-74A0A0B4J1X5 117 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 IGHV3-66A0A0C4DH42 116 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 ZNF98A6NK75 572 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 CCL24O00175 119 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 MRPS12O15235 138 aaKnown RBP5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 BUB3O43684 328 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 SCGB1D1O95968 90 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 CXorf1O96002 111 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 ARL14EPLP0DKL9 152 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 ZP3P21754 424 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 NPPCP23582 126 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 SUMO2P61956 95 aaKnown RBP5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 NSUN5P1Q3KNT7 163 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 IL34Q6ZMJ4 242 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 C1QL4Q86Z23 238 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 GLMPQ8WWB7 406 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 DPF1Q92782 380 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 METTL26Q96S19 204 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 TMPRSS5Q9H3S3 457 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 PPP1R14DQ9NXH3 145 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 UFC1Q9Y3C8 167 aa5.34□□□□□ -1.55
LSM3P3-201ENST00000436601 IGHV7-4-1A0A0J9YVY3 117 aa5.33□□□□□ -1.56
LSM3P3-201ENST00000436601 TMEM213A2RRL7 107 aa5.33□□□□□ -1.56
LSM3P3-201ENST00000436601 LINC00862A6NCI5 91 aa5.33□□□□□ -1.56
LSM3P3-201ENST00000436601 A8MWP6 167 aa5.33□□□□□ -1.56
LSM3P3-201ENST00000436601 H3BQ15 152 aa5.33□□□□□ -1.56
LSM3P3-201ENST00000436601 HBE1P02100 147 aa5.33□□□□□ -1.56
LSM3P3-201ENST00000436601 SNRPCP09234 159 aaKnown RBP5.33□□□□□ -1.56
LSM3P3-201ENST00000436601 OR10J4P0C629 311 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms