RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 FOXI2Q6ZQN5 318 aa13.77□□□□□ -0.21
SF3A1-202ENST00000411423 ZNF709Q8N972 641 aa13.77□□□□□ -0.21
SF3A1-202ENST00000411423 LINC00476Q8WZB0 136 aa13.77□□□□□ -0.21
SF3A1-202ENST00000411423 ID1P41134 155 aa13.76□□□□□ -0.21
SF3A1-202ENST00000411423 GALR1P47211 349 aa13.76□□□□□ -0.21
SF3A1-202ENST00000411423 RAB32Q13637 225 aa13.76□□□□□ -0.21
SF3A1-202ENST00000411423 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
SF3A1-202ENST00000411423 MGST2Q99735 147 aa13.76□□□□□ -0.21
SF3A1-202ENST00000411423 SLC35B3Q9H1N7 401 aa13.76□□□□□ -0.21
SF3A1-202ENST00000411423 MGAT4CQ9UBM8 478 aa13.76□□□□□ -0.21
SF3A1-202ENST00000411423 HIGD1AQ9Y241 93 aa13.76□□□□□ -0.21
SF3A1-202ENST00000411423 KMT2AQ03164 3969 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 A0A0J9YX75 114 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 IGSF23A1L1A6 192 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 L7N2F9 121 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 AGPAT2O15120 278 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 HYPMO75409 117 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 DEDDO75618 318 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 CST7O76096 145 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 MIFP14174 115 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 VAMP2P63027 116 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 TEPPQ6URK8 271 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 ARL6Q9H0F7 186 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 CELA1Q9UNI1 258 aa13.75□□□□□ -0.21
SF3A1-202ENST00000411423 MRPS12O15235 138 aaKnown RBP13.74□□□□□ -0.21
SF3A1-202ENST00000411423 SIX6O95475 246 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 OR5G3P0C626 314 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 PRB4P10163 310 aaPredicted RBP13.74□□□□□ -0.21
SF3A1-202ENST00000411423 HLA-DMBP28068 263 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 BCAP31P51572 246 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 SELENOTP62341 195 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 FAM78BQ5VT40 261 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 MORN5Q5VZ52 161 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 NRARPQ7Z6K4 114 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 RNF182Q8N6D2 247 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 OR4B1Q8NGF8 309 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 GGACTQ9BVM4 153 aa13.74□□□□□ -0.21
SF3A1-202ENST00000411423 MEOX2P50222 304 aa13.73□□□□□ -0.21
SF3A1-202ENST00000411423 CAV2P51636 162 aa13.73□□□□□ -0.21
SF3A1-202ENST00000411423 S100A10P60903 97 aa13.73□□□□□ -0.21
SF3A1-202ENST00000411423 RAP2BP61225 183 aa13.73□□□□□ -0.21
SF3A1-202ENST00000411423 ZNF705AQ6ZN79 300 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-202ENST00000411423 ENKURQ8TC29 256 aa13.73□□□□□ -0.21
SF3A1-202ENST00000411423 CLUHP3Q96NS8 147 aa13.73□□□□□ -0.21
SF3A1-202ENST00000411423 ARV1Q9H2C2 271 aa13.73□□□□□ -0.21
SF3A1-202ENST00000411423 BIRC6Q9NR09 4857 aa13.72□□□□□ -0.21
SF3A1-202ENST00000411423 A8MTW9 85 aa13.72□□□□□ -0.21
SF3A1-202ENST00000411423 ZNF705DP0CH99 300 aaPredicted RBP13.72□□□□□ -0.21
SF3A1-202ENST00000411423 ZNF705BP0CI00 300 aaPredicted RBP13.72□□□□□ -0.21
SF3A1-202ENST00000411423 NUTF2P61970 127 aaKnown RBP13.72□□□□□ -0.21
SF3A1-202ENST00000411423 AMTNQ6UX39 209 aa13.72□□□□□ -0.21
SF3A1-202ENST00000411423 TMEM252Q8N6L7 170 aa13.72□□□□□ -0.21
SF3A1-202ENST00000411423 TMEM37Q8WXS4 190 aa13.72□□□□□ -0.21
SF3A1-202ENST00000411423 GPR82Q96P67 336 aa13.72□□□□□ -0.21
SF3A1-202ENST00000411423 KLK5Q9Y337 293 aaPredicted RBP13.72□□□□□ -0.21
SF3A1-202ENST00000411423 ZNF705FA8MVS1 300 aaPredicted RBP13.71□□□□□ -0.21
SF3A1-202ENST00000411423 LY6G6CO95867 125 aa13.71□□□□□ -0.21
SF3A1-202ENST00000411423 SNRPCP09234 159 aaKnown RBP13.71□□□□□ -0.21
SF3A1-202ENST00000411423 FGL1Q08830 312 aa13.71□□□□□ -0.21
SF3A1-202ENST00000411423 VWC2Q2TAL6 325 aa13.71□□□□□ -0.21
SF3A1-202ENST00000411423 ZNF546Q86UE3 836 aa13.71□□□□□ -0.21
SF3A1-202ENST00000411423 C1QTNF4Q9BXJ3 329 aa13.71□□□□□ -0.21
SF3A1-202ENST00000411423 MFFQ9GZY8 342 aa13.71□□□□□ -0.21
SF3A1-202ENST00000411423 HRH4Q9H3N8 390 aa13.71□□□□□ -0.21
SF3A1-202ENST00000411423 RPRMQ9NS64 109 aa13.71□□□□□ -0.21
SF3A1-202ENST00000411423 LYRM2Q9NU23 88 aaPredicted RBP13.71□□□□□ -0.21
SF3A1-202ENST00000411423 A0A087X0K7 114 aa13.7□□□□□ -0.22
SF3A1-202ENST00000411423 GOSR2O14653 212 aa13.7□□□□□ -0.22
SF3A1-202ENST00000411423 PSG9Q00887 426 aa13.7□□□□□ -0.22
SF3A1-202ENST00000411423 MIC13Q5XKP0 118 aa13.7□□□□□ -0.22
SF3A1-202ENST00000411423 Q6ZTC4 211 aa13.7□□□□□ -0.22
SF3A1-202ENST00000411423 ZNF767PQ75MW2 155 aa13.7□□□□□ -0.22
SF3A1-202ENST00000411423 C1orf158Q8N1D5 194 aa13.7□□□□□ -0.22
SF3A1-202ENST00000411423 WDR83OSQ9Y284 106 aa13.7□□□□□ -0.22
SF3A1-202ENST00000411423 RPL7P18124 248 aaKnown RBP13.69□□□□□ -0.22
SF3A1-202ENST00000411423 PRR20EP86478 221 aa13.69□□□□□ -0.22
SF3A1-202ENST00000411423 PRR20CP86479 221 aa13.69□□□□□ -0.22
SF3A1-202ENST00000411423 PRR20DP86480 221 aa13.69□□□□□ -0.22
SF3A1-202ENST00000411423 PRR20BP86481 221 aa13.69□□□□□ -0.22
SF3A1-202ENST00000411423 PRR20AP86496 221 aa13.69□□□□□ -0.22
SF3A1-202ENST00000411423 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
SF3A1-202ENST00000411423 EBLN2Q6P2I7 272 aa13.69□□□□□ -0.22
SF3A1-202ENST00000411423 LINC00305Q7Z4B0 112 aa13.69□□□□□ -0.22
SF3A1-202ENST00000411423 IGHV3OR16-12A0A075B7B8 117 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 INMT-MINDY4F8WBC2 141 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 H0YIZ8 118 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 CXCL3P19876 107 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 SULT1A1P50225 295 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 CNN1P51911 297 aaKnown RBP13.68□□□□□ -0.22
SF3A1-202ENST00000411423 C12orf74Q32Q52 190 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 SPATA31B1PQ5VZV4 182 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 NEU1Q99519 415 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 UQCC1Q9NVA1 299 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 OR5AC2Q9NZP5 309 aa13.68□□□□□ -0.22
SF3A1-202ENST00000411423 TRAV5A0A0B4J249 113 aa13.67□□□□□ -0.22
SF3A1-202ENST00000411423 UBE2L5PA0A1B0GUS4 154 aa13.67□□□□□ -0.22
SF3A1-202ENST00000411423 CRXO43186 299 aaPredicted RBP13.67□□□□□ -0.22
SF3A1-202ENST00000411423 PVALBP20472 110 aaPredicted RBP13.67□□□□□ -0.22
SF3A1-202ENST00000411423 S100A7P31151 101 aa13.67□□□□□ -0.22
SF3A1-202ENST00000411423 CAMLGP49069 296 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms