RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 HAX1O00165 279 aa14.73□□□□□ -0.05
SMC4-201ENST00000344722 SPACA3Q8IXA5 215 aa14.73□□□□□ -0.05
SMC4-201ENST00000344722 OVOL1O14753 267 aa14.73□□□□□ -0.05
SMC4-201ENST00000344722 ETDBQ3ZM63 59 aa14.73□□□□□ -0.05
SMC4-201ENST00000344722 SMKR1H3BMG3 65 aa14.73□□□□□ -0.05
SMC4-201ENST00000344722 TRAV40A0A0B4J280 105 aa14.73□□□□□ -0.05
SMC4-201ENST00000344722 HS3ST6Q96QI5 342 aa14.73□□□□□ -0.05
SMC4-201ENST00000344722 CEACAM8P31997 349 aaPredicted RBP14.72□□□□□ -0.05
SMC4-201ENST00000344722 C17orf82Q86X59 251 aaPredicted RBP14.72□□□□□ -0.05
SMC4-201ENST00000344722 DEFB125Q8N687 156 aa14.72□□□□□ -0.05
SMC4-201ENST00000344722 TMEM75Q8N9X5 138 aa14.72□□□□□ -0.05
SMC4-201ENST00000344722 CABIN1Q9Y6J0 2220 aa14.72□□□□□ -0.05
SMC4-201ENST00000344722 BSPH1Q075Z2 132 aa14.72□□□□□ -0.05
SMC4-201ENST00000344722 FDCSPQ8NFU4 85 aa14.72□□□□□ -0.05
SMC4-201ENST00000344722 MAP1BP46821 2468 aaKnown RBP14.72□□□□□ -0.05
SMC4-201ENST00000344722 C9JAW5 83 aa14.72□□□□□ -0.05
SMC4-201ENST00000344722 GGTLC3B5MD39 225 aa14.71□□□□□ -0.05
SMC4-201ENST00000344722 ETV2O00321 342 aaPredicted RBP14.71□□□□□ -0.05
SMC4-201ENST00000344722 FAM104BQ5XKR9 115 aa14.71□□□□□ -0.05
SMC4-201ENST00000344722 DPH3P1Q9H4G8 78 aa14.71□□□□□ -0.05
SMC4-201ENST00000344722 TRPM7Q96QT4 1865 aa14.71□□□□□ -0.05
SMC4-201ENST00000344722 TMEM8BA6NDV4 472 aa14.71□□□□□ -0.05
SMC4-201ENST00000344722 PLA2G2EQ9NZK7 142 aa14.71□□□□□ -0.05
SMC4-201ENST00000344722 LY6EQ16553 131 aa14.71□□□□□ -0.05
SMC4-201ENST00000344722 KLF5Q13887 457 aaPredicted RBP14.71□□□□□ -0.06
SMC4-201ENST00000344722 CENPVQ7Z7K6 275 aaPredicted RBP14.71□□□□□ -0.06
SMC4-201ENST00000344722 CSTL1Q9H114 145 aa14.71□□□□□ -0.06
SMC4-201ENST00000344722 RNF5Q99942 180 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 TMEM14BQ9NUH8 114 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 PRSS46E5RG02 174 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 IL18BPO95998 194 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 IGHV3-64A0A075B6Q5 118 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 IGHV1-46P01743 117 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 TAL2Q16559 108 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 WIPF2Q8TF74 440 aaPredicted RBP14.7□□□□□ -0.06
SMC4-201ENST00000344722 DUX3Q96PT4 197 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 MLANAQ16655 118 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 COLCA1Q6ZS62 124 aa14.7□□□□□ -0.06
SMC4-201ENST00000344722 CFHR2P36980 270 aa14.69□□□□□ -0.06
SMC4-201ENST00000344722 MORN3Q6PF18 240 aaPredicted RBP14.69□□□□□ -0.06
SMC4-201ENST00000344722 SPAG8Q99932 426 aaPredicted RBP14.69□□□□□ -0.06
SMC4-201ENST00000344722 ZCCHC24Q8N2G6 241 aaKnown RBP14.69□□□□□ -0.06
SMC4-201ENST00000344722 RNASE8Q8TDE3 154 aaKnown RBP14.69□□□□□ -0.06
SMC4-201ENST00000344722 C11orf68Q9H3H3 251 aaKnown RBP14.69□□□□□ -0.06
SMC4-201ENST00000344722 PRB4P10163 310 aaPredicted RBP14.68□□□□□ -0.06
SMC4-201ENST00000344722 PDE6HQ13956 83 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 CLEC2AQ6UVW9 174 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 SPRR3Q9UBC9 169 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 K7EN84 100 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 TIMM23O14925 209 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 B3GALT5-AS1P59052 145 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 FAM57AQ8TBR7 257 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 PLSCR4Q9NRQ2 329 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 TOMM7Q9P0U1 55 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 VCYO14598 125 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 PRSS57Q6UWY2 283 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 SIGLEC15Q6ZMC9 328 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 Q6ZVH6 145 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 CEND1Q8N111 149 aa14.68□□□□□ -0.06
SMC4-201ENST00000344722 SPANXDQ9BXN6 97 aa14.67□□□□□ -0.06
SMC4-201ENST00000344722 TMEM200BQ69YZ2 307 aa14.67□□□□□ -0.06
SMC4-201ENST00000344722 GLMPQ8WWB7 406 aa14.67□□□□□ -0.06
SMC4-201ENST00000344722 SHANK2-AS3Q9BTD1 123 aa14.67□□□□□ -0.06
SMC4-201ENST00000344722 LGALS1P09382 135 aaKnown RBP14.67□□□□□ -0.06
SMC4-201ENST00000344722 Q8TAT8 98 aa14.67□□□□□ -0.06
SMC4-201ENST00000344722 IGKV1D-17A0A075B6S4 117 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 TMEM213A2RRL7 107 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 LMO1P25800 156 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 Q8N8P6 123 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 GHRHP01286 108 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 IGLV3-1P01715 115 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 C1orf122Q6ZSJ8 110 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 WDR90Q96KV7 1748 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 TET1Q8NFU7 2136 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 IGKV3D-20A0A0C4DH25 116 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 CD24P25063 80 aa14.66□□□□□ -0.06
SMC4-201ENST00000344722 NEU4Q8WWR8 484 aaPredicted RBP14.66□□□□□ -0.06
SMC4-201ENST00000344722 LCNL1Q6ZST4 164 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 EDA2RQ9HAV5 297 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 LRRK1Q38SD2 2015 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 MYMXA0A1B0GTQ4 84 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 IGHV1-8P0DP01 117 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 VWC2Q2TAL6 325 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 PIMREGQ9BSJ6 248 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 VGLL1Q99990 258 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 IGHV1-3A0A0C4DH29 117 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 H3BMM0 161 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 UBE2WQ96B02 151 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 TRGV11A0A075B6L2 103 aa14.65□□□□□ -0.06
SMC4-201ENST00000344722 RNF166Q96A37 237 aaPredicted RBP14.65□□□□□ -0.06
SMC4-201ENST00000344722 NUPR1O60356 82 aa14.64□□□□□ -0.07
SMC4-201ENST00000344722 C9orf153Q5TBE3 101 aa14.64□□□□□ -0.07
SMC4-201ENST00000344722 IFITM1P13164 125 aa14.64□□□□□ -0.07
SMC4-201ENST00000344722 DUSP14O95147 198 aaKnown RBP14.64□□□□□ -0.07
SMC4-201ENST00000344722 GAFA1Q96PS6 74 aa14.64□□□□□ -0.07
SMC4-201ENST00000344722 ZNF883P0CG24 379 aa14.64□□□□□ -0.07
SMC4-201ENST00000344722 ZFP36L1Q07352 338 aaKnown RBP14.63□□□□□ -0.07
SMC4-201ENST00000344722 IGKV1-16P04430 117 aa14.63□□□□□ -0.07
SMC4-201ENST00000344722 SIGLEC8Q9NYZ4 499 aa14.63□□□□□ -0.07
SMC4-201ENST00000344722 FAM186AA6NE01 2351 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms