RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 USP5P45974 858 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 IDH3AP50213 366 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 ARSDP51689 593 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 CTBSQ01459 385 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 NLRP13Q86W25 1043 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 GALNT6Q8NCL4 622 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 ADGRB2O60241 1585 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 LRP5O75197 1615 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 RGPD1P0DJD0 1748 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 RBM47A0AV96 593 aaKnown RBP7.4□□□□□ -1.22
PTCD3-219ENST00000494323 C2CD2LO14523 706 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 KHNYNO15037 678 aaKnown RBP7.4□□□□□ -1.22
PTCD3-219ENST00000494323 RPLP1P05386 114 aaKnown RBP7.4□□□□□ -1.22
PTCD3-219ENST00000494323 EPB42P16452 691 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 INPP5BP32019 993 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 TYRO3Q06418 890 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 PTF1AQ7RTS3 328 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 ATCAYQ86WG3 371 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 NPAS4Q8IUM7 802 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 ZSCAN29Q8IWY8 852 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-219ENST00000494323 BEND7Q8N7W2 519 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-219ENST00000494323 PIK3R5Q8WYR1 880 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 CEP63Q96MT8 703 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 RBCK1Q9BYM8 510 aa7.4□□□□□ -1.22
PTCD3-219ENST00000494323 CAMTA1Q9Y6Y1 1673 aa7.4□□□□□ -1.23
PTCD3-219ENST00000494323 THSD7AQ9UPZ6 1657 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 ATP7BP35670 1465 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 DISP2A7MBM2 1401 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 SSH2Q76I76 1423 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 POLR3AO14802 1390 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-219ENST00000494323 CNTNAP5Q8WYK1 1306 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 UNCXA6NJT0 531 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 SHISA8B8ZZ34 492 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 OPLAHO14841 1288 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 FAM157BP0CG42 384 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
PTCD3-219ENST00000494323 YY1P25490 414 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 SLCO4C1Q6ZQN7 724 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 EDARADDQ8WWZ3 215 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 ASB16Q96NS5 453 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 PPP1R1BQ9UD71 204 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-219ENST00000494323 GGA1Q9UJY5 639 aa7.39□□□□□ -1.23
PTCD3-219ENST00000494323 CRYBG1Q9Y4K1 1723 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 KCNQ2O43526 872 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 PDGFAP04085 211 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 ARAFP10398 606 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 CD33P20138 364 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 DNM1Q05193 864 aaKnown RBP7.38□□□□□ -1.23
PTCD3-219ENST00000494323 TNP2Q05952 138 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-219ENST00000494323 TOM1L2Q6ZVM7 507 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 TTC16Q8NEE8 873 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 GPR152Q8TDT2 470 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 EDEM1Q92611 657 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 PDGFDQ9GZP0 370 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-219ENST00000494323 SPON1Q9HCB6 807 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 BRD7Q9NPI1 651 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 C11orf16Q9NQ32 467 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 CCDC87Q9NVE4 849 aa7.38□□□□□ -1.23
PTCD3-219ENST00000494323 THRAP3Q9Y2W1 955 aaKnown RBP7.38□□□□□ -1.23
PTCD3-219ENST00000494323 TNS1Q9HBL0 1735 aaKnown RBP7.38□□□□□ -1.23
PTCD3-219ENST00000494323 AMPD1P23109 780 aa7.37□□□□□ -1.23
PTCD3-219ENST00000494323 LAMC2Q13753 1193 aa7.37□□□□□ -1.23
PTCD3-219ENST00000494323 DDB1Q16531 1140 aa7.37□□□□□ -1.23
PTCD3-219ENST00000494323 RGL4Q8IZJ4 473 aa7.37□□□□□ -1.23
PTCD3-219ENST00000494323 RRAGCQ9HB90 399 aa7.37□□□□□ -1.23
PTCD3-219ENST00000494323 POLIQ9UNA4 740 aa7.37□□□□□ -1.23
PTCD3-219ENST00000494323 FNDC3AQ9Y2H6 1198 aaKnown RBP7.37□□□□□ -1.23
PTCD3-219ENST00000494323 RTCBQ9Y3I0 505 aaKnown RBP7.37□□□□□ -1.23
PTCD3-219ENST00000494323 CPDO75976 1380 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 PARD3Q8TEW0 1356 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 ARHGEF28Q8N1W1 1705 aaKnown RBP7.36□□□□□ -1.23
PTCD3-219ENST00000494323 USP19O94966 1318 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 CENPJQ9HC77 1338 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-219ENST00000494323 KAT6BQ8WYB5 2073 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 EFSO43281 561 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 KCNQ4P56696 695 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 EHHADHQ08426 723 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 GJD3Q8N144 294 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 MARCH10Q8NA82 808 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-219ENST00000494323 TMC1Q8TDI8 760 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 DMRTB1Q96MA1 342 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 KCNH4Q9UQ05 1017 aa7.36□□□□□ -1.23
PTCD3-219ENST00000494323 PPIP5K1Q6PFW1 1433 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 ITSN1Q15811 1721 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 PHRF1Q9P1Y6 1649 aaKnown RBP7.35□□□□□ -1.23
PTCD3-219ENST00000494323 ANKRD33BA6NCL7 494 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 NEURL1BA8MQ27 555 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 E9PSI1 815 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 PLSCR1O15162 318 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 ZBTB7AO95365 584 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 ADH6P28332 368 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 TMC7Q7Z402 723 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 CMTR1Q8N1G2 835 aaKnown RBP7.35□□□□□ -1.23
PTCD3-219ENST00000494323 FAM129BQ96TA1 746 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 AVENQ9NQS1 362 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-219ENST00000494323 MARK1Q9P0L2 795 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 MKL2Q9ULH7 1088 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 PRR12Q9ULL5 1215 aa7.35□□□□□ -1.23
PTCD3-219ENST00000494323 EPXP11678 715 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms