RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 C3orf79P0CE67 100 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 FBXL19-AS1Q494R0 122 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 TCF24Q7RTU0 167 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 FAM19A2Q8N3H0 131 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 SLC25A39Q9BZJ4 359 aaPredicted RBP7.1□□□□□ -1.27
NCBP3-204ENST00000574911 OTORQ9NRC9 128 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 TTC28Q96AY4 2481 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 LYZP61626 148 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 FOXC1Q12948 553 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 ZNF672Q499Z4 452 aaPredicted RBP7.1□□□□□ -1.27
NCBP3-204ENST00000574911 LDLRAD2Q5SZI1 272 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 RBM14Q96PK6 669 aaKnown RBP7.1□□□□□ -1.27
NCBP3-204ENST00000574911 WNT10AQ9GZT5 417 aa7.1□□□□□ -1.27
NCBP3-204ENST00000574911 CNOT1A5YKK6 2376 aaKnown RBP7.1□□□□□ -1.27
NCBP3-204ENST00000574911 HOXB4P17483 251 aaPredicted RBP7.09□□□□□ -1.27
NCBP3-204ENST00000574911 GPR6P46095 362 aaPredicted RBP7.09□□□□□ -1.27
NCBP3-204ENST00000574911 CAMPP49913 170 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 OR8B3Q8NGG8 313 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 GTSF1Q8WW33 167 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 OR8B2Q96RD0 313 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
NCBP3-204ENST00000574911 GFRA4Q9GZZ7 299 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 SOX21Q9Y651 276 aaPredicted RBP7.09□□□□□ -1.27
NCBP3-204ENST00000574911 TRBV6-1A0A0K0K1D8 114 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 A6NNC1 897 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 FAM90A27PA6NNH2 459 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 A8MWL6 223 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 NPIPB6E9PJ23 425 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 K7EIM0 57 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 IGKV1-17P01599 117 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 P01737 135 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 LIPFP07098 398 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 GRNP28799 593 aaKnown RBP7.09□□□□□ -1.27
NCBP3-204ENST00000574911 HBBP68871 147 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 PLGLAQ15195 96 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 BORCS7Q96B45 105 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 RASL11BQ9BPW5 248 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 ONECUT1Q9UBC0 465 aa7.09□□□□□ -1.27
NCBP3-204ENST00000574911 TIMM23O14925 209 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 IGLV2-11P01706 119 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 NTF3P20783 257 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 SPATA45Q537H7 98 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 Q86TA4 180 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 TMEM190Q8WZ59 177 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 CFHR4Q92496 578 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 NAV3Q8IVL0 2385 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 BTF3P20290 206 aaKnown RBP7.08□□□□□ -1.28
NCBP3-204ENST00000574911 ARFGEF3Q5TH69 2177 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 EXOC3-AS1Q8N2X6 119 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 OR11H6Q8NGC7 330 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 URB1-AS1Q96HZ7 61 aa7.08□□□□□ -1.28
NCBP3-204ENST00000574911 FAM231BA6NCW3 169 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 H3BRN7 92 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 ZGRF1Q86YA3 2104 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 NPBQ8NG41 125 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 OR2D3Q8NGH3 330 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 DAZAP1Q96EP5 407 aaKnown RBP7.07□□□□□ -1.28
NCBP3-204ENST00000574911 PGLYRP4Q96LB8 373 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 SHANK2-AS3Q9BTD1 123 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 SCNM1Q9BWG6 230 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 FAM181BA6NEQ2 426 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 NBR2O15453 112 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 HSBP1O75506 76 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 NDUFA3O95167 84 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 CNIH1O95406 144 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 HTR1DP28221 377 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 RBPMS2Q6ZRY4 209 aaKnown RBP7.07□□□□□ -1.28
NCBP3-204ENST00000574911 CIARTQ8N365 385 aaPredicted RBP7.07□□□□□ -1.28
NCBP3-204ENST00000574911 DPM3Q9P2X0 92 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 TRBV19A0A075B6N1 114 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 TRAV8-1A0A0A6YYK1 113 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 M0R2Z0 102 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 OVOL3O00110 214 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
NCBP3-204ENST00000574911 IGLC2P0DOY2 106 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 EBLN2Q6P2I7 272 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 GOLT1AQ6ZVE7 132 aa7.07□□□□□ -1.28
NCBP3-204ENST00000574911 WI2-2373I1.2A0A1W2PRP0 233 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 ZNF785A8K8V0 405 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 ODF3BA8MYP8 253 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 MRPS12O15235 138 aaKnown RBP7.06□□□□□ -1.28
NCBP3-204ENST00000574911 IGLC3P0DOY3 106 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 ARF6P62330 175 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 FAM162BQ5T6X4 162 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 RNASEKQ6P5S7 137 aaKnown RBP7.06□□□□□ -1.28
NCBP3-204ENST00000574911 PRNTQ86SH4 94 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 ZNF491Q8N8L2 437 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 TMEM75Q8N9X5 138 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 UQCR10Q9UDW1 63 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 RNF24Q9Y225 148 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 ANKRD11Q6UB99 2663 aaPredicted RBP7.06□□□□□ -1.28
NCBP3-204ENST00000574911 C2orf70A6NJV1 201 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 M0R1W7 72 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 HAX1O00165 279 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 APOHP02749 345 aaPredicted RBP7.06□□□□□ -1.28
NCBP3-204ENST00000574911 FOXA3P55318 350 aaPredicted RBP7.06□□□□□ -1.28
NCBP3-204ENST00000574911 PMCHL1Q16048 86 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 PRR31Q5SQ13 230 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 SIGLEC15Q6ZMC9 328 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 Q71RC1 249 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms