RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 HELTA6NFD8 242 aa12.91□□□□□ -0.34
LITAF-212ENST00000573332 MPDU1O75352 247 aa12.91□□□□□ -0.34
LITAF-212ENST00000573332 CD7P09564 240 aa12.91□□□□□ -0.34
LITAF-212ENST00000573332 LINC00869P0C866 280 aa12.91□□□□□ -0.34
LITAF-212ENST00000573332 S100A7P31151 101 aa12.91□□□□□ -0.34
LITAF-212ENST00000573332 CAMLGP49069 296 aa12.91□□□□□ -0.34
LITAF-212ENST00000573332 AP2S1P53680 142 aaPredicted RBP12.91□□□□□ -0.34
LITAF-212ENST00000573332 CD81P60033 236 aa12.91□□□□□ -0.34
LITAF-212ENST00000573332 PAFAH1B2P68402 229 aa12.91□□□□□ -0.34
LITAF-212ENST00000573332 C19orf73Q9NVV2 129 aa12.91□□□□□ -0.34
LITAF-212ENST00000573332 UBE2L5PA0A1B0GUS4 154 aa12.9□□□□□ -0.34
LITAF-212ENST00000573332 ORM2P19652 201 aa12.9□□□□□ -0.34
LITAF-212ENST00000573332 Q5BKY6 102 aa12.9□□□□□ -0.34
LITAF-212ENST00000573332 GGTLC1Q9BX51 225 aa12.9□□□□□ -0.34
LITAF-212ENST00000573332 FBXL17Q9UF56 701 aa12.9□□□□□ -0.34
LITAF-212ENST00000573332 HYPMO75409 117 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 RPL29P47914 159 aaKnown RBP12.89□□□□□ -0.35
LITAF-212ENST00000573332 CMC4P56277 68 aaPredicted RBP12.89□□□□□ -0.35
LITAF-212ENST00000573332 PRR20EP86478 221 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 PRR20CP86479 221 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 PRR20DP86480 221 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 PRR20BP86481 221 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 PRR20AP86496 221 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 Q6ZNX1 250 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 S100A7AQ86SG5 101 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 OR1B1Q8NGR6 318 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 OR2T35Q8NGX2 323 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
LITAF-212ENST00000573332 IGHV4-30-4P0DP06 118 aa12.88□□□□□ -0.35
LITAF-212ENST00000573332 FGF7P21781 194 aa12.88□□□□□ -0.35
LITAF-212ENST00000573332 CLINT1Q14677 625 aa12.88□□□□□ -0.35
LITAF-212ENST00000573332 OPCMLQ14982 345 aa12.88□□□□□ -0.35
LITAF-212ENST00000573332 SIGLEC15Q6ZMC9 328 aa12.88□□□□□ -0.35
LITAF-212ENST00000573332 AQP10Q96PS8 301 aa12.88□□□□□ -0.35
LITAF-212ENST00000573332 ATP5SQ99766 215 aa12.88□□□□□ -0.35
LITAF-212ENST00000573332 HIGD1AQ9Y241 93 aa12.88□□□□□ -0.35
LITAF-212ENST00000573332 IGKV3-7A0A075B6H7 116 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 ZNF98A6NK75 572 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 OR11H12B2RN74 326 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 G3V3Q6 166 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 H3BRN7 92 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 DNASE2O00115 360 aaPredicted RBP12.87□□□□□ -0.35
LITAF-212ENST00000573332 RPL11P62913 178 aaKnown RBP12.87□□□□□ -0.35
LITAF-212ENST00000573332 PATE2Q6UY27 113 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 Q6ZRG5 221 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 GBGT1Q8N5D6 347 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 DCANP1Q8TF63 244 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 PPP1R14BQ96C90 147 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 GPR82Q96P67 336 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 B9D2Q9BPU9 175 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 SHANK2-AS3Q9BTD1 123 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 SLC25A39Q9BZJ4 359 aaPredicted RBP12.87□□□□□ -0.35
LITAF-212ENST00000573332 WDR61Q9GZS3 305 aaKnown RBP12.87□□□□□ -0.35
LITAF-212ENST00000573332 ARL6Q9H0F7 186 aa12.87□□□□□ -0.35
LITAF-212ENST00000573332 ELOA3CA0A087WX78 387 aaPredicted RBP12.86□□□□□ -0.35
LITAF-212ENST00000573332 K7EQG2 157 aa12.86□□□□□ -0.35
LITAF-212ENST00000573332 OR5G3P0C626 314 aa12.86□□□□□ -0.35
LITAF-212ENST00000573332 ODF3L2Q3SX64 289 aa12.86□□□□□ -0.35
LITAF-212ENST00000573332 MIC13Q5XKP0 118 aa12.86□□□□□ -0.35
LITAF-212ENST00000573332 NPCDR1Q9BY65 106 aa12.86□□□□□ -0.35
LITAF-212ENST00000573332 PARD6GQ9BYG4 376 aaPredicted RBP12.86□□□□□ -0.35
LITAF-212ENST00000573332 ARV1Q9H2C2 271 aa12.86□□□□□ -0.35
LITAF-212ENST00000573332 SEPSECSQ9HD40 501 aaKnown RBP12.86□□□□□ -0.35
LITAF-212ENST00000573332 DOK5Q9P104 306 aa12.86□□□□□ -0.35
LITAF-212ENST00000573332 RNF24Q9Y225 148 aa12.86□□□□□ -0.35
LITAF-212ENST00000573332 TFPI2P48307 235 aa12.85□□□□□ -0.35
LITAF-212ENST00000573332 B2MP61769 119 aa12.85□□□□□ -0.35
LITAF-212ENST00000573332 LINC00322Q6ZN03 302 aaPredicted RBP12.85□□□□□ -0.35
LITAF-212ENST00000573332 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
LITAF-212ENST00000573332 DEFB125Q8N687 156 aa12.85□□□□□ -0.35
LITAF-212ENST00000573332 STXBP6Q8NFX7 210 aa12.85□□□□□ -0.35
LITAF-212ENST00000573332 TMEM37Q8WXS4 190 aa12.85□□□□□ -0.35
LITAF-212ENST00000573332 NRN1Q9NPD7 142 aa12.85□□□□□ -0.35
LITAF-212ENST00000573332 SLC39A9Q9NUM3 307 aa12.85□□□□□ -0.35
LITAF-212ENST00000573332 TNFSF18Q9UNG2 199 aa12.85□□□□□ -0.35
LITAF-212ENST00000573332 PRKDCP78527 4128 aaKnown RBP12.84□□□□□ -0.35
LITAF-212ENST00000573332 IFNA5P01569 189 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 FRMD6-AS1P0C7T7 363 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 WFDC3Q8IUB2 231 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 OR1L4Q8NGR5 311 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 PFDN5Q99471 154 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 SCRT1Q9BWW7 348 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 SMIM3Q9BZL3 60 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 TUBA4BQ9H853 241 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 WFDC1Q9HC57 220 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 DNAJC4Q9NNZ3 241 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 KCNIP2Q9NS61 270 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 PXMP4Q9Y6I8 212 aa12.84□□□□□ -0.35
LITAF-212ENST00000573332 RNF222A6NCQ9 220 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 COX7A2P2O60397 106 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 GALR1P47211 349 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 INO80EQ8NBZ0 244 aaPredicted RBP12.83□□□□□ -0.36
LITAF-212ENST00000573332 UHRF2Q96PU4 802 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 WFDC10AQ9H1F0 79 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 SLC25A32Q9H2D1 315 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 SRD5A3Q9H8P0 318 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 SLC25A22Q9H936 323 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 MAP6D1Q9H9H5 199 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 UBQLN2Q9UHD9 624 aa12.83□□□□□ -0.36
LITAF-212ENST00000573332 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 307.7 ms