RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PLA2G2EQ9NZK7 142 aa9.26□□□□□ -0.93
SF3B3-202ENST00000562722 SCP2D1Q9UJQ7 156 aa9.26□□□□□ -0.93
SF3B3-202ENST00000562722 A0A0B4J2A0 478 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 SNRPGP15A8MWD9 76 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 F6UB75 175 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 CTDSP2O14595 271 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 ANXA3P12429 323 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 GPX4P36969 197 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-202ENST00000562722 GAMTQ14353 236 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 C1orf194Q5T5A4 169 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 FAM78BQ5VT40 261 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 SPATA31B1PQ5VZV4 182 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 LYZL2Q7Z4W2 148 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 DIRAS2Q96HU8 199 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 C16orf92Q96LL3 132 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 MAGT1Q9H0U3 335 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 SHPKQ9UHJ6 478 aa9.25□□□□□ -0.93
SF3B3-202ENST00000562722 YTHDF2Q9Y5A9 579 aaKnown RBP9.25□□□□□ -0.93
SF3B3-202ENST00000562722 IGKV1D-37A0A075B6S9 117 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 ISLRO14498 428 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 SOCS3O14543 225 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 ATP5IP56385 69 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-202ENST00000562722 DAD1P61803 113 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 RAB11AP62491 216 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 SRPXP78539 464 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 ZNF79Q15937 498 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 RRN3P1Q2M238 152 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 SAMD13Q5VXD3 122 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 CLUHP3Q96NS8 147 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 SLC25A22Q9H936 323 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 RPRMQ9NS64 109 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 TMED3Q9Y3Q3 217 aa9.24□□□□□ -0.93
SF3B3-202ENST00000562722 A0A0J9YX75 114 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 CTDSPLO15194 276 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 SMIM18P0DKX4 95 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 IAPPP10997 89 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 GALR1P47211 349 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 RNF212Q495C1 297 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 TMEM88Q6PEY1 159 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 GPR141Q7Z602 305 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 C1orf158Q8N1D5 194 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 DOK5Q9P104 306 aa9.23□□□□□ -0.93
SF3B3-202ENST00000562722 ANKRD20A5PA0PJZ0 165 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 MEOX2P50222 304 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 PAX9P55771 341 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 SPCS2Q15005 226 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 OXA1LQ15070 435 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 C1orf134Q5TEV5 83 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 Q6ZR54 194 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 ZNF575Q86XF7 245 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 TRGV9Q99603 122 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 ATG101Q9BSB4 218 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 RSG1Q9BU20 258 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 RABL2AQ9UBK7 228 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-202ENST00000562722 RABL2BQ9UNT1 228 aa9.22□□□□□ -0.93
SF3B3-202ENST00000562722 PIGBOS1A0A0B4J2F0 54 aa9.21□□□□□ -0.94
SF3B3-202ENST00000562722 GGNBP1Q5YKI7 109 aa9.21□□□□□ -0.94
SF3B3-202ENST00000562722 TMED4Q7Z7H5 227 aa9.21□□□□□ -0.94
SF3B3-202ENST00000562722 C20orf173Q96LM9 149 aa9.21□□□□□ -0.94
SF3B3-202ENST00000562722 SLC25A32Q9H2D1 315 aa9.21□□□□□ -0.94
SF3B3-202ENST00000562722 RSL24D1Q9UHA3 163 aaKnown RBP9.21□□□□□ -0.94
SF3B3-202ENST00000562722 PKD1P98161 4303 aa9.21□□□□□ -0.94
SF3B3-202ENST00000562722 CFDP00746 253 aaPredicted RBP9.2□□□□□ -0.94
SF3B3-202ENST00000562722 INSP01308 110 aa9.2□□□□□ -0.94
SF3B3-202ENST00000562722 ORM2P19652 201 aa9.2□□□□□ -0.94
SF3B3-202ENST00000562722 VAMP1P23763 118 aa9.2□□□□□ -0.94
SF3B3-202ENST00000562722 RPP30P78346 268 aaKnown RBP9.2□□□□□ -0.94
SF3B3-202ENST00000562722 IGF2BP2-AS1Q96M15 143 aa9.2□□□□□ -0.94
SF3B3-202ENST00000562722 MRPS26Q9BYN8 205 aaKnown RBP9.2□□□□□ -0.94
SF3B3-202ENST00000562722 ZNF98A6NK75 572 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 ZNF705GA8MUZ8 300 aaPredicted RBP9.19□□□□□ -0.94
SF3B3-202ENST00000562722 MED6O75586 246 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 DUSP14O95147 198 aaKnown RBP9.19□□□□□ -0.94
SF3B3-202ENST00000562722 DEFB130BP0DP73 79 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 DEFB130AP0DP74 79 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 S100A7P31151 101 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 AKR1C1Q04828 323 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 FGL1Q08830 312 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 SPINK13Q1W4C9 94 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 THAP8Q8NA92 274 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 C15orf53Q8NAA6 179 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 BPIFCQ8NFQ6 507 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 OR1B1Q8NGR6 318 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 TMEM147Q9BVK8 224 aa9.19□□□□□ -0.94
SF3B3-202ENST00000562722 CCDC59Q9P031 241 aaKnown RBP9.19□□□□□ -0.94
SF3B3-202ENST00000562722 IGKV1OR2-108A0A075B7D4 117 aa9.18□□□□□ -0.94
SF3B3-202ENST00000562722 DUXBA0A1W2PPF3 345 aa9.18□□□□□ -0.94
SF3B3-202ENST00000562722 M0R2Z0 102 aa9.18□□□□□ -0.94
SF3B3-202ENST00000562722 FAUP35544 74 aaKnown RBP9.18□□□□□ -0.94
SF3B3-202ENST00000562722 CNN1P51911 297 aaKnown RBP9.18□□□□□ -0.94
SF3B3-202ENST00000562722 IGFL4Q6B9Z1 124 aa9.18□□□□□ -0.94
SF3B3-202ENST00000562722 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.18□□□□□ -0.94
SF3B3-202ENST00000562722 GPR82Q96P67 336 aa9.18□□□□□ -0.94
SF3B3-202ENST00000562722 CIB3Q96Q77 187 aaPredicted RBP9.18□□□□□ -0.94
SF3B3-202ENST00000562722 SLC45A2Q9UMX9 530 aa9.18□□□□□ -0.94
SF3B3-202ENST00000562722 SMCO3A2RU48 225 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 FABP12A6NFH5 140 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 F5H768 121 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 WRBO00258 174 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms