RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 GGTLC1Q9BX51 225 aa7.93□□□□□ -1.14
LINC00239-201ENST00000556973 MAP6D1Q9H9H5 199 aa7.93□□□□□ -1.14
LINC00239-201ENST00000556973 DNAH9Q9NYC9 4486 aa7.93□□□□□ -1.14
LINC00239-201ENST00000556973 COL7A1Q02388 2944 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 KIR2DL5BA0A0G2JN68 375 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 KIR2DL5BA0A0G2JPC4 375 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 E5RGE8 158 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 SULT1A1P50225 295 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 APOC4P55056 127 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 PLP1P60201 277 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 HBG1P69891 147 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 HBG2P69892 147 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 SLC38A11Q08AI6 406 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 ATP6V1FQ16864 119 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 S100A7AQ86SG5 101 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 STX12Q86Y82 276 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 KIR2DL5AQ8N109 375 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 KIR2DL5BQ8NHK3 375 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 DCANP1Q8TF63 244 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 TMEM147Q9BVK8 224 aa7.92□□□□□ -1.14
LINC00239-201ENST00000556973 SEPSECSQ9HD40 501 aaKnown RBP7.92□□□□□ -1.14
LINC00239-201ENST00000556973 IGSF23A1L1A6 192 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 UBE2CO00762 179 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 AGPAT2O15120 278 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 HYPMO75409 117 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 DEFB131AP59861 70 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 RAB31Q13636 194 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 VWC2Q2TAL6 325 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 LRRC37A5PQ49AS3 106 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 PXDC1Q5TGL8 231 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 OR8I2Q8N0Y5 310 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 FAM24BQ8N5W8 94 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 TMEM217Q8N7C4 229 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 STPG3Q8N7X2 389 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 OR1B1Q8NGR6 318 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 SLC25A31Q9H0C2 315 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 NRN1Q9NPD7 142 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 UQCC1Q9NVA1 299 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 ALG5Q9Y673 324 aa7.91□□□□□ -1.14
LINC00239-201ENST00000556973 ZNF98A6NK75 572 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 PET100P0DJ07 73 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 RAP2BP61225 183 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 SNRPD3P62318 126 aaKnown RBP7.9□□□□□ -1.14
LINC00239-201ENST00000556973 NHLH2Q02577 135 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 ZNF124Q15973 351 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 Q6ZWC4 215 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 ZNF546Q86UE3 836 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 PPP1R1CQ8WVI7 109 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 OR5AC2Q9NZP5 309 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 RNF24Q9Y225 148 aa7.9□□□□□ -1.14
LINC00239-201ENST00000556973 H0YIZ8 118 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 MPC2O95563 127 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 OR5G3P0C626 314 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 ZNF688P0C7X2 276 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 LINC00869P0C866 280 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 RPL35AP18077 110 aaKnown RBP7.89□□□□□ -1.15
LINC00239-201ENST00000556973 GALR1P47211 349 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 CAMLGP49069 296 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 RGS21Q2M5E4 152 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 SAMD13Q5VXD3 122 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 LEMD1Q68G75 181 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 STHQ8IWL8 128 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 CHAC2Q8WUX2 184 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 GPR82Q96P67 336 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 MGST2Q99735 147 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 RNF126Q9BV68 326 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 SLC25A39Q9BZJ4 359 aaPredicted RBP7.89□□□□□ -1.15
LINC00239-201ENST00000556973 ARL6Q9H0F7 186 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 CSTL1Q9H114 145 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 SLC25A22Q9H936 323 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 DOK5Q9P104 306 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 HIGD1AQ9Y241 93 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 WDR83OSQ9Y284 106 aa7.89□□□□□ -1.15
LINC00239-201ENST00000556973 ELOA3CA0A087WX78 387 aaPredicted RBP7.88□□□□□ -1.15
LINC00239-201ENST00000556973 MPDU1O75352 247 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 ID1P41134 155 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 MEOX2P50222 304 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 EWSR1Q01844 656 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC00239-201ENST00000556973 BAXQ07812 192 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 PSMG4Q5JS54 123 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 PATE2Q6UY27 113 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 Q6ZRG5 221 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 SHANK2-AS3Q9BTD1 123 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 MED28Q9H204 178 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 ARV1Q9H2C2 271 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 TP53TG1Q9Y2A0 90 aa7.88□□□□□ -1.15
LINC00239-201ENST00000556973 H3BRN7 92 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 SPRY2O43597 315 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 CXCL3P19876 107 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 RPL29P47914 159 aaKnown RBP7.87□□□□□ -1.15
LINC00239-201ENST00000556973 PRR20EP86478 221 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 PRR20CP86479 221 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 PRR20DP86480 221 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 PRR20BP86481 221 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 PRR20AP86496 221 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 OR5C1Q8NGR4 320 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 OVOL2Q9BRP0 275 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 RSG1Q9BU20 258 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 SCRT1Q9BWW7 348 aa7.87□□□□□ -1.15
LINC00239-201ENST00000556973 SLC25A32Q9H2D1 315 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms