RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 GPR146Q96CH1 333 aa7.98□□□□□ -1.13
CLSTN3-206ENST00000535668 RNF125Q96EQ8 232 aa7.98□□□□□ -1.13
CLSTN3-206ENST00000535668 CACNG5Q9UF02 275 aa7.98□□□□□ -1.13
CLSTN3-206ENST00000535668 RFNGQ9Y644 331 aa7.98□□□□□ -1.13
CLSTN3-206ENST00000535668 IGKV1D-37A0A075B6S9 117 aa7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 A0A0B4J2A0 478 aa7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 CFDP00746 253 aaPredicted RBP7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 INPP1P49441 399 aa7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 AP3S2P59780 193 aa7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 PYDC2Q56P42 97 aa7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 SDHCQ99643 169 aaPredicted RBP7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 MIXL1Q9H2W2 232 aa7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 XCL2Q9UBD3 114 aa7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 EXTL2Q9UBQ6 330 aa7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 SHPKQ9UHJ6 478 aa7.97□□□□□ -1.13
CLSTN3-206ENST00000535668 LRP1BQ9NZR2 4599 aa7.96□□□□□ -1.13
CLSTN3-206ENST00000535668 NAP1L6A6NFF2 107 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 SULT1A3P0DMM9 295 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 SULT1A4P0DMN0 295 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 ID1P41134 155 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 MEOX2P50222 304 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 CCR6P51684 374 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 SUPT4H1P63272 117 aaKnown RBP7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 KLF9Q13886 244 aaPredicted RBP7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 C4orf46Q504U0 113 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 PRRT1Q99946 306 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 SCRT1Q9BWW7 348 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 C14orf166Q9Y224 244 aaKnown RBP7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 NACAE9PAV3 2078 aa7.96□□□□□ -1.14
CLSTN3-206ENST00000535668 FAM25AB3EWG3 89 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 FAM25CB3EWG5 89 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 FAM25GB3EWG6 89 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 PITX3O75364 302 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 FABP1P07148 127 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 SLC25A6P12236 298 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 TSPOP30536 169 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 IL18Q14116 193 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 GAMTQ14353 236 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 GDF5OSQ5U4N7 250 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 TMEM268Q5VZI3 342 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 AMTNQ6UX39 209 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 AKAP14Q86UN6 197 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 LGI3Q8N145 548 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 C1orf158Q8N1D5 194 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 THAP8Q8NA92 274 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 OR4D5Q8NGN0 318 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 ENKURQ8TC29 256 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 TRGV9Q99603 122 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 NIPSNAP3BQ9BS92 247 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 KCNIP3Q9Y2W7 256 aa7.95□□□□□ -1.14
CLSTN3-206ENST00000535668 hCG_2014768A0A024R1R8 64 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 A0A0J9YX75 114 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 DUXBA0A1W2PPF3 345 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 CEBPZOSA8MTT3 80 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 SNRPGP15A8MWD9 76 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 DISC1C4P0D8 188 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 CDK2AP2O75956 126 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 IFNA21P01568 189 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 B2MP61769 119 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 SRPXP78539 464 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 PSG9Q00887 426 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 SMCO1Q147U7 214 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 SOHLH1Q5JUK2 328 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 LRTM2Q8N967 370 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 C15orf53Q8NAA6 179 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 RNASE11Q8TAA1 199 aaKnown RBP7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 C17orf77Q96MU5 243 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 SCGB3A2Q96PL1 93 aa7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 PAIP2BQ9ULR5 123 aaKnown RBP7.94□□□□□ -1.14
CLSTN3-206ENST00000535668 FAM240BA0A1B0GVZ2 78 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 ANKRD20A5PA0PJZ0 165 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 PRSS46E5RG02 174 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 LYRM1O43325 122 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 IFNA10P01566 189 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 AKAIN1P0CW23 69 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 BAK1Q16611 211 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 SCGB2B2Q4G0G5 96 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 FAM222AQ5U5X8 452 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 OR4C16Q8NGL9 310 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 DTD1Q8TEA8 209 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 GPR82Q96P67 336 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 MARVELD1Q9BSK0 173 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 GOLT1BQ9Y3E0 138 aa7.93□□□□□ -1.14
CLSTN3-206ENST00000535668 IGKV1OR2-108A0A075B7D4 117 aa7.92□□□□□ -1.14
CLSTN3-206ENST00000535668 LYRM9A8MSI8 78 aa7.92□□□□□ -1.14
CLSTN3-206ENST00000535668 GGNBP1Q5YKI7 109 aa7.92□□□□□ -1.14
CLSTN3-206ENST00000535668 NRARPQ7Z6K4 114 aa7.92□□□□□ -1.14
CLSTN3-206ENST00000535668 ZBTB8BQ8NAP8 495 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-206ENST00000535668 ACY3Q96HD9 319 aa7.92□□□□□ -1.14
CLSTN3-206ENST00000535668 IGF2BP2-AS1Q96M15 143 aa7.92□□□□□ -1.14
CLSTN3-206ENST00000535668 HBE1P02100 147 aa7.91□□□□□ -1.14
CLSTN3-206ENST00000535668 BTF3P20290 206 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-206ENST00000535668 FAUP35544 74 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-206ENST00000535668 ZNF90Q03938 601 aa7.91□□□□□ -1.14
CLSTN3-206ENST00000535668 RRN3P1Q2M238 152 aa7.91□□□□□ -1.14
CLSTN3-206ENST00000535668 C1orf134Q5TEV5 83 aa7.91□□□□□ -1.14
CLSTN3-206ENST00000535668 FAM78BQ5VT40 261 aa7.91□□□□□ -1.14
CLSTN3-206ENST00000535668 ZNF767PQ75MW2 155 aa7.91□□□□□ -1.14
CLSTN3-206ENST00000535668 OR51S1Q8NGJ8 323 aa7.91□□□□□ -1.14
CLSTN3-206ENST00000535668 RBKSQ9H477 322 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms