RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZNF736B4DX44 427 aaPredicted RBP1.35□□□□□ -2.19
SMC4-218ENST00000486711 IFNA1P01562 189 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 NFYBP25208 207 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 CNBPP62633 177 aaKnown RBP1.35□□□□□ -2.19
SMC4-218ENST00000486711 GNG5P63218 68 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 POU6F1Q14863 301 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 IFT20Q8IY31 132 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 LINC00526Q96FQ7 95 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 TEX37Q96LM6 180 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 PBDC1Q9BVG4 233 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 LYRM2Q9NU23 88 aaPredicted RBP1.35□□□□□ -2.19
SMC4-218ENST00000486711 MED29Q9NX70 200 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 LY96Q9Y6Y9 160 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 CAMSAP1Q5T5Y3 1602 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 KIF1BO60333 1816 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 ARFGEF3Q5TH69 2177 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 ALPK2Q86TB3 2170 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 LAMB2P55268 1798 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 TMEM256-PLSCR3K7ERE1 68 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 M0R378 163 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 APOA2P02652 100 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 DEFB115Q30KQ5 88 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 C2orf82Q6UX34 121 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 ST6GALNAC3Q8NDV1 305 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 OR10K1Q8NGX5 313 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 NPCDR1Q9BY65 106 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 CDC42SE1Q9NRR8 79 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 PCTPQ9UKL6 214 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 ZFP30Q9Y2G7 519 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 COL4A5P29400 1685 aa1.34□□□□□ -2.19
SMC4-218ENST00000486711 MED12LQ86YW9 2145 aa1.34□□□□□ -2.2
SMC4-218ENST00000486711 TCRBV4S1A1TA0A5B7 111 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 M0R2N4 97 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 HLA-EP13747 358 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 DYNLT3P51808 116 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 KRTAP10-4P60372 401 aaPredicted RBP1.33□□□□□ -2.2
SMC4-218ENST00000486711 FAM74A1Q5RGS3 127 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 Q8IYB0 196 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 OBSCN-AS1Q96MR7 158 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 OR2J1Q9GZK6 312 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 SH3BGRL3Q9H299 93 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 MICAL3Q7RTP6 2002 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 SBF1O95248 1867 aa1.33□□□□□ -2.2
SMC4-218ENST00000486711 TAF1LQ8IZX4 1826 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 RIIAD1A6NNX1 92 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 INE1O15225 51 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 PPP1R2P41236 205 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 MPV17LQ2QL34 196 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 GDF5OSQ5U4N7 250 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 C4orf22Q6V702 233 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 MALSU1Q96EH3 234 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 TP53RKQ96S44 253 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 PAIP2Q9BPZ3 127 aaKnown RBP1.32□□□□□ -2.2
SMC4-218ENST00000486711 GINS3Q9BRX5 216 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 PBOV1Q9GZY1 135 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 C22orf24Q9Y442 160 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 EIF3AQ14152 1382 aaKnown RBP1.32□□□□□ -2.2
SMC4-218ENST00000486711 DOCK3Q8IZD9 2030 aa1.32□□□□□ -2.2
SMC4-218ENST00000486711 ARHGEF28Q8N1W1 1705 aaKnown RBP1.32□□□□□ -2.2
SMC4-218ENST00000486711 DIDO1Q9BTC0 2240 aaKnown RBP1.31□□□□□ -2.2
SMC4-218ENST00000486711 IFNA14P01570 189 aa1.31□□□□□ -2.2
SMC4-218ENST00000486711 SNCBQ16143 134 aa1.31□□□□□ -2.2
SMC4-218ENST00000486711 EXOC3-AS1Q8N2X6 119 aa1.31□□□□□ -2.2
SMC4-218ENST00000486711 OR5D14Q8NGL3 314 aa1.31□□□□□ -2.2
SMC4-218ENST00000486711 BORCS5Q969J3 196 aa1.31□□□□□ -2.2
SMC4-218ENST00000486711 LYSMD1Q96S90 227 aa1.31□□□□□ -2.2
SMC4-218ENST00000486711 POPDC3Q9HBV1 291 aa1.31□□□□□ -2.2
SMC4-218ENST00000486711 C17orf112F2Z3M2 114 aa1.3□□□□□ -2.2
SMC4-218ENST00000486711 OR10J4P0C629 311 aa1.3□□□□□ -2.2
SMC4-218ENST00000486711 OGNP20774 298 aaKnown RBP1.3□□□□□ -2.2
SMC4-218ENST00000486711 TCTAP57738 103 aa1.3□□□□□ -2.2
SMC4-218ENST00000486711 PPTC7Q8NI37 304 aa1.3□□□□□ -2.2
SMC4-218ENST00000486711 ZNF714Q96N38 554 aa1.3□□□□□ -2.2
SMC4-218ENST00000486711 SS18L2Q9UHA2 77 aa1.3□□□□□ -2.2
SMC4-218ENST00000486711 KDM6AO15550 1401 aaPredicted RBP1.3□□□□□ -2.2
SMC4-218ENST00000486711 E5RI56 91 aa1.29□□□□□ -2.2
SMC4-218ENST00000486711 CCL16O15467 120 aa1.29□□□□□ -2.2
SMC4-218ENST00000486711 NEFHP12036 1026 aa1.29□□□□□ -2.2
SMC4-218ENST00000486711 GNG3P63215 75 aa1.29□□□□□ -2.2
SMC4-218ENST00000486711 OR4K15Q8NH41 348 aa1.29□□□□□ -2.2
SMC4-218ENST00000486711 ZNF431Q8TF32 576 aaPredicted RBP1.29□□□□□ -2.2
SMC4-218ENST00000486711 IL20Q9NYY1 176 aa1.29□□□□□ -2.2
SMC4-218ENST00000486711 CHCHD2Q9Y6H1 151 aaPredicted RBP1.29□□□□□ -2.2
SMC4-218ENST00000486711 TNS3Q68CZ2 1445 aa1.29□□□□□ -2.2
SMC4-218ENST00000486711 UHRF1BP1Q6BDS2 1440 aa1.29□□□□□ -2.2
SMC4-218ENST00000486711 TRAV10A0A0B4J240 114 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 CRHP06850 196 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 DSCR4P56555 118 aaPredicted RBP1.28□□□□□ -2.2
SMC4-218ENST00000486711 TAS2R41P59536 307 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 ROMO1P60602 79 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 LYG2Q86SG7 212 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 CROCCP2Q86T23 111 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 OR5D16Q8NGK9 328 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 PATE1Q8WXA2 126 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 ZHX1-C8orf76Q96EF9 292 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 GID8Q9NWU2 228 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 TAS2R7Q9NYW3 318 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 ORMDL1Q9P0S3 153 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 DENND4CQ5VZ89 1909 aa1.28□□□□□ -2.2
SMC4-218ENST00000486711 OBSL1O75147 1896 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms