RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 LINC00305Q7Z4B0 112 aa13.5□□□□□ -0.25
UPF3A-206ENST00000480362 SFT2D1Q8WV19 159 aa13.5□□□□□ -0.25
UPF3A-206ENST00000480362 MBD3L1Q8WWY6 194 aa13.5□□□□□ -0.25
UPF3A-206ENST00000480362 UHRF2Q96PU4 802 aa13.5□□□□□ -0.25
UPF3A-206ENST00000480362 A0A1W2PRX2 142 aa13.49□□□□□ -0.25
UPF3A-206ENST00000480362 RPEL1Q2QD12 228 aa13.49□□□□□ -0.25
UPF3A-206ENST00000480362 DEFB136Q30KP8 78 aa13.49□□□□□ -0.25
UPF3A-206ENST00000480362 KRTAP24-1Q3LI83 254 aa13.49□□□□□ -0.25
UPF3A-206ENST00000480362 C20orf24Q9BUV8 137 aa13.49□□□□□ -0.25
UPF3A-206ENST00000480362 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
UPF3A-206ENST00000480362 TRAV5A0A0B4J249 113 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 A0A1B0GV50 99 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 MAP1LC3B2A6NCE7 125 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 FAM106AQ4KMX7 169 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 AWAT1Q58HT5 328 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 MORN5Q5VZ52 161 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 UNQ9165/PRO28630Q6UXU0 137 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 C8orf86Q6ZUL3 223 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 OR11H1Q8NG94 326 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 OR1N2Q8NGR9 330 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 SLC25A39Q9BZJ4 359 aaPredicted RBP13.48□□□□□ -0.25
UPF3A-206ENST00000480362 MAP1LC3BQ9GZQ8 125 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 HRH4Q9H3N8 390 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 RABAC1Q9UI14 185 aa13.48□□□□□ -0.25
UPF3A-206ENST00000480362 ZNF320A2RRD8 509 aa13.47□□□□□ -0.25
UPF3A-206ENST00000480362 LINC01619G3V211 115 aa13.47□□□□□ -0.25
UPF3A-206ENST00000480362 ZNF207O43670 478 aaKnown RBP13.47□□□□□ -0.25
UPF3A-206ENST00000480362 FGF8P55075 233 aaPredicted RBP13.47□□□□□ -0.25
UPF3A-206ENST00000480362 DPF1Q92782 380 aa13.47□□□□□ -0.25
UPF3A-206ENST00000480362 TECRQ9NZ01 308 aaKnown RBP13.47□□□□□ -0.25
UPF3A-206ENST00000480362 TRAV1-1A0A0B4J248 108 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 H3BRN7 92 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 HBE1P02100 147 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 STAG3L2P0CL84 134 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 STAG3L3P0CL85 134 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 C8orf88P0DMB2 117 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 ZP3P21754 424 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 HOXD3P31249 432 aaPredicted RBP13.46□□□□□ -0.25
UPF3A-206ENST00000480362 S100A7AQ86SG5 101 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 LYPD6BQ8NI32 183 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 TMEM190Q8WZ59 177 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 DUX3Q96PT4 197 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 SHANK2-AS3Q9BTD1 123 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 SCRT1Q9BWW7 348 aa13.46□□□□□ -0.25
UPF3A-206ENST00000480362 TEX46H3BTG2 121 aa13.45□□□□□ -0.26
UPF3A-206ENST00000480362 NPPCP23582 126 aa13.45□□□□□ -0.26
UPF3A-206ENST00000480362 TAS2R45P59539 299 aa13.45□□□□□ -0.26
UPF3A-206ENST00000480362 CCL20P78556 96 aa13.45□□□□□ -0.26
UPF3A-206ENST00000480362 LEMD1Q68G75 181 aa13.45□□□□□ -0.26
UPF3A-206ENST00000480362 RAX2Q96IS3 184 aa13.45□□□□□ -0.26
UPF3A-206ENST00000480362 FAM167A-AS1Q96KT0 104 aa13.45□□□□□ -0.26
UPF3A-206ENST00000480362 METTL26Q96S19 204 aa13.45□□□□□ -0.26
UPF3A-206ENST00000480362 SLC25A2Q9BXI2 301 aa13.45□□□□□ -0.26
UPF3A-206ENST00000480362 ZNF98A6NK75 572 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 ADARB2-AS1A8MUL3 147 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 CXorf1O96002 111 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 CRYBB3P26998 211 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 S100A7P31151 101 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 SLURP1P55000 103 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 KLF5Q13887 457 aaPredicted RBP13.44□□□□□ -0.26
UPF3A-206ENST00000480362 NSUN5P1Q3KNT7 163 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 KHDC3LQ587J8 217 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 C2CD3Q4AC94 2353 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 NF1P21359 2839 aa13.44□□□□□ -0.26
UPF3A-206ENST00000480362 TEP1Q99973 2627 aaKnown RBP13.43□□□□□ -0.26
UPF3A-206ENST00000480362 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 K7EMT4 169 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 OR7C2O60412 319 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 SYNJ2BPP57105 145 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 TM4SF20Q53R12 229 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 IL34Q6ZMJ4 242 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 NDUFA11Q86Y39 141 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 C1QL4Q86Z23 238 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 ZNF503Q96F45 646 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 TMPRSS5Q9H3S3 457 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 UFC1Q9Y3C8 167 aa13.43□□□□□ -0.26
UPF3A-206ENST00000480362 CCL24O00175 119 aa13.42□□□□□ -0.26
UPF3A-206ENST00000480362 LGALS9O00182 355 aa13.42□□□□□ -0.26
UPF3A-206ENST00000480362 APOHP02749 345 aaPredicted RBP13.42□□□□□ -0.26
UPF3A-206ENST00000480362 GCHFRP30047 84 aa13.42□□□□□ -0.26
UPF3A-206ENST00000480362 PQLC2Q6ZP29 291 aa13.42□□□□□ -0.26
UPF3A-206ENST00000480362 REC114Q7Z4M0 266 aa13.42□□□□□ -0.26
UPF3A-206ENST00000480362 IQCF2Q8IXL9 164 aa13.42□□□□□ -0.26
UPF3A-206ENST00000480362 OR51M1Q9H341 326 aa13.42□□□□□ -0.26
UPF3A-206ENST00000480362 PFDN2Q9UHV9 154 aa13.42□□□□□ -0.26
UPF3A-206ENST00000480362 U3KQE9 123 aa13.42□□□□□ -0.26
UPF3A-206ENST00000480362 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
UPF3A-206ENST00000480362 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
UPF3A-206ENST00000480362 IGHV3-66A0A0C4DH42 116 aa13.41□□□□□ -0.26
UPF3A-206ENST00000480362 LINC00862A6NCI5 91 aa13.41□□□□□ -0.26
UPF3A-206ENST00000480362 BUB3O43684 328 aa13.41□□□□□ -0.26
UPF3A-206ENST00000480362 PAXXQ9BUH6 204 aa13.41□□□□□ -0.26
UPF3A-206ENST00000480362 DAZ1Q9NQZ3 744 aaKnown RBP13.41□□□□□ -0.26
UPF3A-206ENST00000480362 RNF24Q9Y225 148 aa13.41□□□□□ -0.26
UPF3A-206ENST00000480362 IGHV7-4-1A0A0J9YVY3 117 aa13.4□□□□□ -0.26
UPF3A-206ENST00000480362 OR10J4P0C629 311 aa13.4□□□□□ -0.26
UPF3A-206ENST00000480362 PYYP10082 97 aa13.4□□□□□ -0.26
UPF3A-206ENST00000480362 FHL3Q13643 280 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms