RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 WFDC10AQ9H1F0 79 aa20.88■□□□□ 0.93
SMARCC1-203ENST00000454240 TRAV2A0A0B4J234 112 aa20.87■□□□□ 0.93
SMARCC1-203ENST00000454240 HELTA6NFD8 242 aa20.87■□□□□ 0.93
SMARCC1-203ENST00000454240 GIPP09681 153 aaPredicted RBP20.87■□□□□ 0.93
SMARCC1-203ENST00000454240 ORM2P19652 201 aa20.87■□□□□ 0.93
SMARCC1-203ENST00000454240 DEFB125Q8N687 156 aa20.87■□□□□ 0.93
SMARCC1-203ENST00000454240 OR5C1Q8NGR4 320 aa20.87■□□□□ 0.93
SMARCC1-203ENST00000454240 LINC00869P0C866 280 aa20.86■□□□□ 0.93
SMARCC1-203ENST00000454240 TFPI2P48307 235 aa20.86■□□□□ 0.93
SMARCC1-203ENST00000454240 AP2S1P53680 142 aaPredicted RBP20.86■□□□□ 0.93
SMARCC1-203ENST00000454240 ZNF546Q86UE3 836 aa20.86■□□□□ 0.93
SMARCC1-203ENST00000454240 FAM110AQ9BQ89 295 aa20.86■□□□□ 0.93
SMARCC1-203ENST00000454240 RAB31Q13636 194 aa20.85■□□□□ 0.93
SMARCC1-203ENST00000454240 ODF3L2Q3SX64 289 aa20.85■□□□□ 0.93
SMARCC1-203ENST00000454240 C1orf194Q5T5A4 169 aa20.85■□□□□ 0.93
SMARCC1-203ENST00000454240 OR1B1Q8NGR6 318 aa20.85■□□□□ 0.93
SMARCC1-203ENST00000454240 THAP6Q8TBB0 222 aa20.85■□□□□ 0.93
SMARCC1-203ENST00000454240 TUBA4BQ9H853 241 aa20.85■□□□□ 0.93
SMARCC1-203ENST00000454240 TGP01266 2768 aa20.85■□□□□ 0.93
SMARCC1-203ENST00000454240 UBE2L5PA0A1B0GUS4 154 aa20.84■□□□□ 0.93
SMARCC1-203ENST00000454240 DNASE2O00115 360 aaPredicted RBP20.84■□□□□ 0.93
SMARCC1-203ENST00000454240 RPL12P30050 165 aaKnown RBP20.84■□□□□ 0.93
SMARCC1-203ENST00000454240 CAMLGP49069 296 aa20.84■□□□□ 0.93
SMARCC1-203ENST00000454240 WFDC3Q8IUB2 231 aa20.84■□□□□ 0.93
SMARCC1-203ENST00000454240 UBQLN2Q9UHD9 624 aa20.84■□□□□ 0.93
SMARCC1-203ENST00000454240 RAP2BP61225 183 aa20.83■□□□□ 0.93
SMARCC1-203ENST00000454240 SIGLEC15Q6ZMC9 328 aa20.83■□□□□ 0.93
SMARCC1-203ENST00000454240 CHAC2Q8WUX2 184 aa20.83■□□□□ 0.93
SMARCC1-203ENST00000454240 PPP1R14BQ96C90 147 aa20.83■□□□□ 0.93
SMARCC1-203ENST00000454240 GGTLC1Q9BX51 225 aa20.83■□□□□ 0.93
SMARCC1-203ENST00000454240 DOK5Q9P104 306 aa20.83■□□□□ 0.93
SMARCC1-203ENST00000454240 HSPB11Q9Y547 144 aa20.83■□□□□ 0.93
SMARCC1-203ENST00000454240 K7EQG2 157 aa20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 HYPMO75409 117 aa20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 CMC4P56277 68 aaPredicted RBP20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 FGL1Q08830 312 aa20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 PXDC1Q5TGL8 231 aa20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 LINC00322Q6ZN03 302 aaPredicted RBP20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 STXBP6Q8NFX7 210 aa20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 DCANP1Q8TF63 244 aa20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 ARL6Q9H0F7 186 aa20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 SRD5A3Q9H8P0 318 aa20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 FBXL17Q9UF56 701 aa20.82■□□□□ 0.92
SMARCC1-203ENST00000454240 ZNF98A6NK75 572 aa20.81■□□□□ 0.92
SMARCC1-203ENST00000454240 S100A7P31151 101 aa20.81■□□□□ 0.92
SMARCC1-203ENST00000454240 Q5BKY6 102 aa20.81■□□□□ 0.92
SMARCC1-203ENST00000454240 PATE2Q6UY27 113 aa20.81■□□□□ 0.92
SMARCC1-203ENST00000454240 SBSPONQ8IVN8 264 aa20.81■□□□□ 0.92
SMARCC1-203ENST00000454240 HIGD1AQ9Y241 93 aa20.81■□□□□ 0.92
SMARCC1-203ENST00000454240 MPDU1O75352 247 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 FGF7P21781 194 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 PRR20EP86478 221 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 PRR20CP86479 221 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 PRR20DP86480 221 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 PRR20BP86481 221 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 PRR20AP86496 221 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 CLINT1Q14677 625 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 CITED4Q96RK1 184 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 SLC25A39Q9BZJ4 359 aaPredicted RBP20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 COL7A1Q02388 2944 aa20.8■□□□□ 0.92
SMARCC1-203ENST00000454240 RBMY1BA6NDE4 496 aaKnown RBP20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 RBMY1EA6NEQ0 496 aaKnown RBP20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 H3BRN7 92 aa20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 OR5G3P0C626 314 aa20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 RBMY1DP0C7P1 496 aaKnown RBP20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 RPL29P47914 159 aaKnown RBP20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 OPCMLQ14982 345 aa20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 OR8I2Q8N0Y5 310 aa20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 FAM24BQ8N5W8 94 aa20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 ASCL2Q99929 193 aa20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 MAP6D1Q9H9H5 199 aa20.79■□□□□ 0.92
SMARCC1-203ENST00000454240 MIC13Q5XKP0 118 aa20.78■□□□□ 0.92
SMARCC1-203ENST00000454240 SHANK2-AS3Q9BTD1 123 aa20.78■□□□□ 0.92
SMARCC1-203ENST00000454240 ARV1Q9H2C2 271 aa20.78■□□□□ 0.92
SMARCC1-203ENST00000454240 NRN1Q9NPD7 142 aa20.78■□□□□ 0.92
SMARCC1-203ENST00000454240 NHLRC4P0CG21 123 aaPredicted RBP20.77■□□□□ 0.92
SMARCC1-203ENST00000454240 UHRF2Q96PU4 802 aa20.77■□□□□ 0.92
SMARCC1-203ENST00000454240 ATP5SQ99766 215 aa20.77■□□□□ 0.92
SMARCC1-203ENST00000454240 SCRT1Q9BWW7 348 aa20.77■□□□□ 0.92
SMARCC1-203ENST00000454240 NPCDR1Q9BY65 106 aa20.77■□□□□ 0.92
SMARCC1-203ENST00000454240 SLC25A32Q9H2D1 315 aa20.77■□□□□ 0.92
SMARCC1-203ENST00000454240 SLC25A22Q9H936 323 aa20.77■□□□□ 0.92
SMARCC1-203ENST00000454240 Q6ZRG5 221 aa20.76■□□□□ 0.91
SMARCC1-203ENST00000454240 S100A7AQ86SG5 101 aa20.76■□□□□ 0.91
SMARCC1-203ENST00000454240 APRG1Q8IVJ8 170 aa20.76■□□□□ 0.91
SMARCC1-203ENST00000454240 TMEM37Q8WXS4 190 aa20.76■□□□□ 0.91
SMARCC1-203ENST00000454240 WDR61Q9GZS3 305 aaKnown RBP20.76■□□□□ 0.91
SMARCC1-203ENST00000454240 ELOA3CA0A087WX78 387 aaPredicted RBP20.75■□□□□ 0.91
SMARCC1-203ENST00000454240 LEMD1Q68G75 181 aa20.75■□□□□ 0.91
SMARCC1-203ENST00000454240 OR2T35Q8NGX2 323 aa20.75■□□□□ 0.91
SMARCC1-203ENST00000454240 SLC39A9Q9NUM3 307 aa20.75■□□□□ 0.91
SMARCC1-203ENST00000454240 B2MP61769 119 aa20.74■□□□□ 0.91
SMARCC1-203ENST00000454240 HAGHQ16775 308 aa20.74■□□□□ 0.91
SMARCC1-203ENST00000454240 GPR82Q96P67 336 aa20.74■□□□□ 0.91
SMARCC1-203ENST00000454240 AQP10Q96PS8 301 aa20.74■□□□□ 0.91
SMARCC1-203ENST00000454240 SMIM3Q9BZL3 60 aa20.74■□□□□ 0.91
SMARCC1-203ENST00000454240 SEPSECSQ9HD40 501 aaKnown RBP20.74■□□□□ 0.91
SMARCC1-203ENST00000454240 DNAJC4Q9NNZ3 241 aa20.74■□□□□ 0.91
SMARCC1-203ENST00000454240 PXMP4Q9Y6I8 212 aa20.74■□□□□ 0.91
SMARCC1-203ENST00000454240 G3V3Q6 166 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms