RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 ZNF705FA8MVS1 300 aaPredicted RBP19.43■□□□□ 0.7
USP42-204ENST00000451154 ZNF705DP0CH99 300 aaPredicted RBP19.43■□□□□ 0.7
USP42-204ENST00000451154 ZNF705BP0CI00 300 aaPredicted RBP19.43■□□□□ 0.7
USP42-204ENST00000451154 PSMB3P49720 205 aa19.43■□□□□ 0.7
USP42-204ENST00000451154 COQ8AQ8NI60 647 aa19.43■□□□□ 0.7
USP42-204ENST00000451154 MAGT1Q9H0U3 335 aa19.43■□□□□ 0.7
USP42-204ENST00000451154 LRTM2Q8N967 370 aa19.42■□□□□ 0.7
USP42-204ENST00000451154 SLC35B3Q9H1N7 401 aa19.42■□□□□ 0.7
USP42-204ENST00000451154 DNAH17Q9UFH2 4485 aa19.42■□□□□ 0.7
USP42-204ENST00000451154 DNAH2Q9P225 4427 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 SMIM9A6NGZ8 99 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 F6UB75 175 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 MED6O75586 246 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 AMBPP02760 352 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 SPART-AS1P0CW21 52 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 SLC25A6P12236 298 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 AP3S2P59780 193 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 ZNF709Q8N972 641 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 THAP8Q8NA92 274 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 NDUFAF3Q9BU61 184 aa19.41■□□□□ 0.7
USP42-204ENST00000451154 CLUHP3Q96NS8 147 aa19.4■□□□□ 0.7
USP42-204ENST00000451154 WRBO00258 174 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 ISLRO14498 428 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 SFT2D2O95562 160 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 HOXB5P09067 269 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 PPP1R1AQ13522 171 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 ZNF79Q15937 498 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 FAM78BQ5VT40 261 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 EBLN2Q6P2I7 272 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 C20orf173Q96LM9 149 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 SLC25A21Q9BQT8 299 aaPredicted RBP19.39■□□□□ 0.69
USP42-204ENST00000451154 V9GYH0 126 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 KIAA1109Q2LD37 5005 aa19.39■□□□□ 0.69
USP42-204ENST00000451154 TMEM189A5PLL7 270 aa19.38■□□□□ 0.69
USP42-204ENST00000451154 SYNGR2O43760 224 aa19.38■□□□□ 0.69
USP42-204ENST00000451154 PSG9Q00887 426 aa19.38■□□□□ 0.69
USP42-204ENST00000451154 GGNBP1Q5YKI7 109 aa19.38■□□□□ 0.69
USP42-204ENST00000451154 POM121L12Q8N7R1 296 aa19.38■□□□□ 0.69
USP42-204ENST00000451154 CIB3Q96Q77 187 aaPredicted RBP19.38■□□□□ 0.69
USP42-204ENST00000451154 FAT2Q9NYQ8 4349 aa19.38■□□□□ 0.69
USP42-204ENST00000451154 PLA2G2EQ9NZK7 142 aa19.38■□□□□ 0.69
USP42-204ENST00000451154 TMED3Q9Y3Q3 217 aa19.38■□□□□ 0.69
USP42-204ENST00000451154 RFNGQ9Y644 331 aa19.38■□□□□ 0.69
USP42-204ENST00000451154 PRSS46E5RG02 174 aa19.37■□□□□ 0.69
USP42-204ENST00000451154 GATA2P23769 480 aaPredicted RBP19.37■□□□□ 0.69
USP42-204ENST00000451154 RPP30P78346 268 aaKnown RBP19.37■□□□□ 0.69
USP42-204ENST00000451154 SPATA31B1PQ5VZV4 182 aa19.37■□□□□ 0.69
USP42-204ENST00000451154 TMEM182Q6ZP80 229 aaPredicted RBP19.37■□□□□ 0.69
USP42-204ENST00000451154 C16orf92Q96LL3 132 aa19.37■□□□□ 0.69
USP42-204ENST00000451154 RSG1Q9BU20 258 aa19.37■□□□□ 0.69
USP42-204ENST00000451154 SLC25A32Q9H2D1 315 aa19.37■□□□□ 0.69
USP42-204ENST00000451154 SLC25A22Q9H936 323 aa19.37■□□□□ 0.69
USP42-204ENST00000451154 A0A0J9YX75 114 aa19.36■□□□□ 0.69
USP42-204ENST00000451154 P0DMU3 169 aa19.36■□□□□ 0.69
USP42-204ENST00000451154 FAM231AP0DMU4 169 aa19.36■□□□□ 0.69
USP42-204ENST00000451154 FAM231CP0DMU5 169 aa19.36■□□□□ 0.69
USP42-204ENST00000451154 PAX9P55771 341 aa19.36■□□□□ 0.69
USP42-204ENST00000451154 SPANXN5Q5MJ07 72 aa19.36■□□□□ 0.69
USP42-204ENST00000451154 C17orf77Q96MU5 243 aa19.36■□□□□ 0.69
USP42-204ENST00000451154 DKK2Q9UBU2 259 aa19.36■□□□□ 0.69
USP42-204ENST00000451154 ZNF98A6NK75 572 aa19.35■□□□□ 0.69
USP42-204ENST00000451154 CFDP00746 253 aaPredicted RBP19.35■□□□□ 0.69
USP42-204ENST00000451154 ORM2P19652 201 aa19.35■□□□□ 0.69
USP42-204ENST00000451154 GALR1P47211 349 aa19.35■□□□□ 0.69
USP42-204ENST00000451154 FAM222AQ5U5X8 452 aa19.35■□□□□ 0.69
USP42-204ENST00000451154 C1orf158Q8N1D5 194 aa19.35■□□□□ 0.69
USP42-204ENST00000451154 RPRMQ9NS64 109 aa19.35■□□□□ 0.69
USP42-204ENST00000451154 C7orf50Q9BRJ6 194 aaKnown RBP19.34■□□□□ 0.69
USP42-204ENST00000451154 GOLT1BQ9Y3E0 138 aa19.34■□□□□ 0.69
USP42-204ENST00000451154 H3BP45 60 aa19.33■□□□□ 0.68
USP42-204ENST00000451154 M0R2N4 97 aa19.33■□□□□ 0.68
USP42-204ENST00000451154 MEOX2P50222 304 aa19.33■□□□□ 0.68
USP42-204ENST00000451154 BPIFCQ8NFQ6 507 aa19.33■□□□□ 0.68
USP42-204ENST00000451154 NIPSNAP3BQ9BS92 247 aa19.33■□□□□ 0.68
USP42-204ENST00000451154 S100A5P33763 92 aa19.32■□□□□ 0.68
USP42-204ENST00000451154 SAMD13Q5VXD3 122 aa19.32■□□□□ 0.68
USP42-204ENST00000451154 LINC00336Q6ZUF6 198 aa19.32■□□□□ 0.68
USP42-204ENST00000451154 OR1B1Q8NGR6 318 aa19.32■□□□□ 0.68
USP42-204ENST00000451154 DOK5Q9P104 306 aa19.32■□□□□ 0.68
USP42-204ENST00000451154 SLC45A2Q9UMX9 530 aa19.32■□□□□ 0.68
USP42-204ENST00000451154 STRAPQ9Y3F4 350 aaKnown RBP19.32■□□□□ 0.68
USP42-204ENST00000451154 HBE1P02100 147 aa19.31■□□□□ 0.68
USP42-204ENST00000451154 AKR1C1Q04828 323 aa19.31■□□□□ 0.68
USP42-204ENST00000451154 IGFL4Q6B9Z1 124 aa19.31■□□□□ 0.68
USP42-204ENST00000451154 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.31■□□□□ 0.68
USP42-204ENST00000451154 CCDC190Q86UF4 302 aa19.31■□□□□ 0.68
USP42-204ENST00000451154 DEDD2Q8WXF8 326 aa19.31■□□□□ 0.68
USP42-204ENST00000451154 LOC102723971A0A1B0GUV8 181 aa19.3■□□□□ 0.68
USP42-204ENST00000451154 CCDC160A6NGH7 325 aa19.3■□□□□ 0.68
USP42-204ENST00000451154 HTN3P15516 51 aa19.3■□□□□ 0.68
USP42-204ENST00000451154 ACOT7LQ6ZUV0 252 aa19.3■□□□□ 0.68
USP42-204ENST00000451154 TMEM147Q9BVK8 224 aa19.3■□□□□ 0.68
USP42-204ENST00000451154 PKHD1P08F94 4074 aa19.29■□□□□ 0.68
USP42-204ENST00000451154 ADAP1O75689 374 aa19.29■□□□□ 0.68
USP42-204ENST00000451154 OR4D5Q8NGN0 318 aa19.29■□□□□ 0.68
USP42-204ENST00000451154 YTHDF2Q9Y5A9 579 aaKnown RBP19.29■□□□□ 0.68
USP42-204ENST00000451154 A8MTW9 85 aa19.28■□□□□ 0.68
USP42-204ENST00000451154 POLR2GP62487 172 aaKnown RBP eCLIP19.28■□□□□ 0.68
USP42-204ENST00000451154 ID3Q02535 119 aa19.28■□□□□ 0.68
USP42-204ENST00000451154 RRN3P1Q2M238 152 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms