RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 NUDT19A8MXV4 375 aa7.42□□□□□ -1.22
RIF1-202ENST00000414861 LINC00305Q7Z4B0 112 aa7.42□□□□□ -1.22
RIF1-202ENST00000414861 GATAD1Q8WUU5 269 aa7.42□□□□□ -1.22
RIF1-202ENST00000414861 SAT2Q96F10 170 aaPredicted RBP7.42□□□□□ -1.22
RIF1-202ENST00000414861 SCRT1Q9BWW7 348 aa7.42□□□□□ -1.22
RIF1-202ENST00000414861 MRPL27Q9P0M9 148 aaKnown RBP7.42□□□□□ -1.22
RIF1-202ENST00000414861 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 MAP1LC3B2A6NCE7 125 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 RHOBP62745 196 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 AWAT1Q58HT5 328 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 OR1L4Q8NGR5 311 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 SFT2D1Q8WV19 159 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 PFDN5Q99471 154 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 C20orf24Q9BUV8 137 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 ACTR3CQ9C0K3 210 aaPredicted RBP7.41□□□□□ -1.22
RIF1-202ENST00000414861 MAP1LC3BQ9GZQ8 125 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 HRH4Q9H3N8 390 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 FUT9Q9Y231 359 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 HIGD1AQ9Y241 93 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 TSSC4Q9Y5U2 329 aaPredicted RBP7.41□□□□□ -1.22
RIF1-202ENST00000414861 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
RIF1-202ENST00000414861 A0A1B0GUS0 222 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 A0A1W2PPV4 95 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 NDUFA4O00483 81 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 EDN2P20800 178 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 HOXD3P31249 432 aaPredicted RBP7.41□□□□□ -1.22
RIF1-202ENST00000414861 SLURP1P55000 103 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 RAB14P61106 215 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 FOXL1Q12952 345 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 RPEL1Q2QD12 228 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 OR11H1Q8NG94 326 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 LRRC20Q8TCA0 184 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 TMEM190Q8WZ59 177 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 FAM167A-AS1Q96KT0 104 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 SLC25A39Q9BZJ4 359 aaPredicted RBP7.41□□□□□ -1.22
RIF1-202ENST00000414861 STAB1Q9NY15 2570 aa7.41□□□□□ -1.22
RIF1-202ENST00000414861 IGHV3-49A0A0A0MS15 119 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 H3BRN7 92 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 HSPB1P04792 205 aaKnown RBP7.4□□□□□ -1.22
RIF1-202ENST00000414861 ARL14EPLP0DKL9 152 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 BLOC1S1P78537 153 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 CCL20P78556 96 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 LYPD6BQ8NI32 183 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 MBD3L1Q8WWY6 194 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 ZNF503Q96F45 646 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 RAX2Q96IS3 184 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 SLC25A2Q9BXI2 301 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 COL6A5A8TX70 2615 aa7.4□□□□□ -1.22
RIF1-202ENST00000414861 IGHV3OR16-13A0A075B7E8 117 aa7.4□□□□□ -1.23
RIF1-202ENST00000414861 IGHV3-74A0A0B4J1X5 117 aa7.4□□□□□ -1.23
RIF1-202ENST00000414861 ZNF320A2RRD8 509 aa7.4□□□□□ -1.23
RIF1-202ENST00000414861 APOHP02749 345 aaPredicted RBP7.4□□□□□ -1.23
RIF1-202ENST00000414861 STAG3L2P0CL84 134 aa7.4□□□□□ -1.23
RIF1-202ENST00000414861 STAG3L3P0CL85 134 aa7.4□□□□□ -1.23
RIF1-202ENST00000414861 SHANK2-AS3Q9BTD1 123 aa7.4□□□□□ -1.23
RIF1-202ENST00000414861 C19orf24Q9BVV8 132 aa7.4□□□□□ -1.23
RIF1-202ENST00000414861 MRPL32Q9BYC8 188 aaKnown RBP7.4□□□□□ -1.23
RIF1-202ENST00000414861 TMPRSS5Q9H3S3 457 aa7.4□□□□□ -1.23
RIF1-202ENST00000414861 RABAC1Q9UI14 185 aa7.4□□□□□ -1.23
RIF1-202ENST00000414861 SYNJ2BPP57105 145 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 NSUN5P1Q3KNT7 163 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 GPHB5Q86YW7 130 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 TRRAPQ9Y4A5 3859 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 VWFP04275 2813 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 TRAV1-1A0A0B4J248 108 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 IGHV3-66A0A0C4DH42 116 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 ZNF98A6NK75 572 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 LINC01619G3V211 115 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 SNRPCP09234 159 aaKnown RBP7.39□□□□□ -1.23
RIF1-202ENST00000414861 C8orf88P0DMB2 117 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 PYYP10082 97 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 FHL3Q13643 280 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 TM4SF20Q53R12 229 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 OR1N2Q8NGR9 330 aa7.39□□□□□ -1.23
RIF1-202ENST00000414861 OR7C2O60412 319 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 OR10J4P0C629 311 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 CRYBB3P26998 211 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 IQCF2Q8IXL9 164 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 METTL26Q96S19 204 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 RNF2Q99496 336 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 TECRQ9NZ01 308 aaKnown RBP7.38□□□□□ -1.23
RIF1-202ENST00000414861 TMEM213A2RRL7 107 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 CCL24O00175 119 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 GP9P14770 177 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 ZP3P21754 424 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 KLF5Q13887 457 aaPredicted RBP7.38□□□□□ -1.23
RIF1-202ENST00000414861 FAM106AQ4KMX7 169 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 KHDC3LQ587J8 217 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 DPF1Q92782 380 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 DAZ1Q9NQZ3 744 aaKnown RBP7.38□□□□□ -1.23
RIF1-202ENST00000414861 SELENOKQ9Y6D0 94 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 U3KQE9 123 aa7.38□□□□□ -1.23
RIF1-202ENST00000414861 BUB3O43684 328 aa7.37□□□□□ -1.23
RIF1-202ENST00000414861 GCHFRP30047 84 aa7.37□□□□□ -1.23
RIF1-202ENST00000414861 TAS2R45P59539 299 aa7.37□□□□□ -1.23
RIF1-202ENST00000414861 REC114Q7Z4M0 266 aa7.37□□□□□ -1.23
RIF1-202ENST00000414861 NDUFA11Q86Y39 141 aa7.37□□□□□ -1.23
RIF1-202ENST00000414861 DLX4Q92988 240 aaPredicted RBP7.37□□□□□ -1.23
RIF1-202ENST00000414861 CITED1Q99966 193 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms