RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 S100A7P31151 101 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 HILS1P60008 231 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 PLP1P60201 277 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 RPEL1Q2QD12 228 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 COA6Q5JTJ3 125 aaKnown RBP10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 ACTL10Q5JWF8 245 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 MINOS1Q5TGZ0 78 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 TEX38Q6PEX7 206 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 HIST3H2BBQ8N257 126 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 OR5AU1Q8NGC0 362 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 SMIM12Q96EX1 92 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 ZNF747Q9BV97 191 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 NIT2Q9NQR4 276 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 TRAPPC1Q9Y5R8 145 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 MINOS1-NBL1R4GNA1 71 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 NOTCH1P46531 2555 aa10.24□□□□□ -0.77
SMARCB1-203ENST00000407082 TRAV30A0A087WSZ9 112 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 PSMB11A5LHX3 300 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 HYPMO75409 117 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 CNIH1O95406 144 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 MOSP00540 346 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 SUMO1P63165 101 aaKnown RBP10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 ZNF90Q03938 601 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 MLANAQ16655 118 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 HIST2H2BDQ6DRA6 164 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 WDR73Q6P4I2 378 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 TMEM37Q8WXS4 190 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 FNDC4Q9H6D8 234 aaPredicted RBP10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 ZNF355PQ9NSJ1 428 aa10.23□□□□□ -0.77
SMARCB1-203ENST00000407082 TNCP24821 2201 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 IGHV3-72A0A0B4J1Y9 119 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 E7EUB6 86 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 ISLRO14498 428 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 PHOX2AO14813 284 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 NBR2O15453 112 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 CRYBB3P26998 211 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 LGALS4P56470 323 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 ERVFC1-1P60608 527 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 NPBQ8NG41 125 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 SRSF12Q8WXF0 261 aaKnown RBP10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 FAM167A-AS1Q96KT0 104 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 RBM14Q96PK6 669 aaKnown RBP10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 DERL1Q9BUN8 251 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 SLC25A2Q9BXI2 301 aa10.22□□□□□ -0.77
SMARCB1-203ENST00000407082 XKRY2A2RUG3 117 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 J3QLI3 93 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 GCGP01275 180 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 MT-ND6P03923 174 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 GATA2P23769 480 aaPredicted RBP10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 YPEL3P61236 119 aaPredicted RBP10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 ARF6P62330 175 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 PAX8Q06710 450 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 MRGPRG-AS1Q2M3A8 158 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 CENPWQ5EE01 88 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 C10orf55Q5SWW7 151 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 HCP5Q6MZN7 132 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 TMEM18Q96B42 140 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 ZNF503Q96F45 646 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 C7orf69Q9H7B7 122 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 C1RLQ9NZP8 487 aa10.21□□□□□ -0.77
SMARCB1-203ENST00000407082 IGKV1D-37A0A075B6S9 117 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 ODF3BA8MYP8 253 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 NDUFA3O95167 84 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 MMDQ15546 238 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 OR10D4PQ8NGN7 298 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 ELOVL1Q9BW60 279 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 FBXL15Q9H469 300 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 TPSG1Q9NRR2 321 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 THYN1Q9P016 225 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 TBL2Q9Y4P3 447 aaKnown RBP10.2□□□□□ -0.78
SMARCB1-203ENST00000407082 TRBV20OR9-2A0A075B6H5 130 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 TEX22C9J3V5 150 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 TIMM23O14925 209 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 TOX4O94842 621 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 REG1AP05451 166 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 UBE2G1P62253 170 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 PATE2Q6UY27 113 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 FAM231DQ6ZW35 169 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 OR1B1Q8NGR6 318 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 RITA1Q96K30 269 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 RASL11BQ9BPW5 248 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 GPR61Q9BZJ8 451 aa10.19□□□□□ -0.78
SMARCB1-203ENST00000407082 GGTLC3B5MD39 225 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 PEX7O00628 323 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 AVPP01185 164 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 NBEAP1P0C6P0 100 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 ORM2P19652 201 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 RPL15P61313 204 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 IBA57Q5T440 356 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 RASL11AQ6T310 242 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 PACRGQ96M98 296 aaPredicted RBP10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 TMEM68Q96MH6 324 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 GNB1LQ9BYB4 327 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 WNT10AQ9GZT5 417 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 ESM1Q9NQ30 184 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 TMEM14CQ9P0S9 112 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 DMRT1Q9Y5R6 373 aa10.18□□□□□ -0.78
SMARCB1-203ENST00000407082 PGPEP1LA6NFU8 196 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms