RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 ATXN8Q156A1 80 aa13.19□□□□□ -0.3
TFAP2B-202ENST00000393655 LYPD2Q6UXB3 125 aa13.19□□□□□ -0.3
TFAP2B-202ENST00000393655 LHFPL4Q7Z7J7 247 aa13.19□□□□□ -0.3
TFAP2B-202ENST00000393655 PTPRFP10586 1907 aa13.19□□□□□ -0.3
TFAP2B-202ENST00000393655 A0A0U1RRA0 63 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 CD300EQ496F6 205 aaPredicted RBP13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 CABIN1Q9Y6J0 2220 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 HAPLN4Q86UW8 402 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 TRPM7Q96QT4 1865 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 J3QLI3 93 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 TCRAP04437 139 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 NHP2Q9NX24 153 aaKnown RBP13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 IFITM2Q01629 132 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 NR2C2APQ86WQ0 139 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 NIT1Q86X76 327 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 TRAV8-2A0A0B4J237 113 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 SH2D1AO60880 128 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 PSG3Q16557 428 aa13.18□□□□□ -0.3
TFAP2B-202ENST00000393655 EREGO14944 169 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 C6orf226Q5I0X4 101 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 KLF17Q5JT82 389 aaPredicted RBP13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 IGKV1D-17A0A075B6S4 117 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 F8VVB4 439 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 F8VWA3 439 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 Q6P435 159 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 MGST2Q99735 147 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 WFDC1Q9HC57 220 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 GREB1LQ9C091 1923 aaPredicted RBP13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 ARID1AO14497 2285 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 IGHV1-69DA0A0B4J2H0 117 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 IGHV1-69P01742 117 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 RUSC1-AS1Q66K80 236 aa13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 PNRC2Q9NPJ4 139 aaKnown RBP13.17□□□□□ -0.3
TFAP2B-202ENST00000393655 A0A087WV48 116 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 DEFB130BP0DP73 79 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 DEFB130AP0DP74 79 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 LYZL1Q6UWQ5 148 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 GATD1Q8NB37 220 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 CA1P00915 261 aaPredicted RBP13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 C21orf62-AS1Q17RA5 79 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 MS4A6AQ9H2W1 248 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 CKAP5Q14008 2032 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 OVOL3O00110 214 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 SPATA31B1PQ5VZV4 182 aa13.16□□□□□ -0.3
TFAP2B-202ENST00000393655 MYOFQ9NZM1 2061 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 TRAV9-2A0A087WT02 112 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 DAD1P61803 113 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 ERG28Q9UKR5 140 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 TPRP12270 2363 aaKnown RBP13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 TRAV3A0A0B4J244 114 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 GZMBP10144 247 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 TMEM249Q2WGJ8 235 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 RASL11AQ6T310 242 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 FAM110DQ8TAY7 271 aaPredicted RBP13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 APC2O95996 2303 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 APOC4P55056 127 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 DEFB131AP59861 70 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 FOXL1Q12952 345 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 VSIRQ9H7M9 311 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 A8MXK9 166 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 H3BUT2 72 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 C1QL4Q86Z23 238 aa13.15□□□□□ -0.3
TFAP2B-202ENST00000393655 LY6HO94772 140 aa13.15□□□□□ -0.31
TFAP2B-202ENST00000393655 LY6G6FQ5SQ64 297 aa13.15□□□□□ -0.31
TFAP2B-202ENST00000393655 FAM90A2PQ658T7 463 aa13.15□□□□□ -0.31
TFAP2B-202ENST00000393655 A0A1B0GV90 55 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 PIKFYVEQ9Y2I7 2098 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 TRAV8-4A0A0B4J246 113 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 BTCP35070 178 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 PRR30Q53SZ7 412 aaPredicted RBP13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 C1orf159Q96HA4 380 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 D6R8Y8 96 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 NMSQ5H8A3 153 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 OVOL2Q9BRP0 275 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 LINC00518Q8N0U6 118 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 GFI1Q99684 422 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 SPOCK3Q9BQ16 436 aa13.14□□□□□ -0.31
TFAP2B-202ENST00000393655 IGFL3Q6UXB1 125 aa13.13□□□□□ -0.31
TFAP2B-202ENST00000393655 SCN8AQ9UQD0 1980 aa13.13□□□□□ -0.31
TFAP2B-202ENST00000393655 CSTL1Q9H114 145 aa13.13□□□□□ -0.31
TFAP2B-202ENST00000393655 LAMTOR3Q9UHA4 124 aa13.13□□□□□ -0.31
TFAP2B-202ENST00000393655 NCR2O95944 276 aa13.13□□□□□ -0.31
TFAP2B-202ENST00000393655 CR1LQ2VPA4 569 aa13.13□□□□□ -0.31
TFAP2B-202ENST00000393655 LHFPL1Q86WI0 220 aa13.13□□□□□ -0.31
TFAP2B-202ENST00000393655 IGHV2-70DA0A0C4DH43 119 aa13.13□□□□□ -0.31
TFAP2B-202ENST00000393655 H0YIZ8 118 aa13.13□□□□□ -0.31
TFAP2B-202ENST00000393655 F5H768 121 aa13.12□□□□□ -0.31
TFAP2B-202ENST00000393655 GATA4P43694 442 aa13.12□□□□□ -0.31
TFAP2B-202ENST00000393655 FOXL2NBQ6ZUU3 175 aa13.12□□□□□ -0.31
TFAP2B-202ENST00000393655 SEC16AO15027 2179 aa13.12□□□□□ -0.31
TFAP2B-202ENST00000393655 SVILO95425 2214 aa13.12□□□□□ -0.31
TFAP2B-202ENST00000393655 DOCK3Q8IZD9 2030 aa13.12□□□□□ -0.31
TFAP2B-202ENST00000393655 ITGB1BP1O14713 200 aa13.12□□□□□ -0.31
TFAP2B-202ENST00000393655 IGKV1-5P01602 117 aa13.12□□□□□ -0.31
TFAP2B-202ENST00000393655 ORAOV1Q8WV07 137 aa13.12□□□□□ -0.31
TFAP2B-202ENST00000393655 FNDC10F2Z333 226 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms