RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SSNA1O43805 119 aa16.58■□□□□ 0.24
ECHDC1-203ENST00000368291 AP2S1P53680 142 aaPredicted RBP16.58■□□□□ 0.24
ECHDC1-203ENST00000368291 DEFB131AP59861 70 aa16.58■□□□□ 0.24
ECHDC1-203ENST00000368291 SLC38A11Q08AI6 406 aa16.58■□□□□ 0.24
ECHDC1-203ENST00000368291 TEPPQ6URK8 271 aa16.58■□□□□ 0.24
ECHDC1-203ENST00000368291 WWC2-AS2Q96NR7 200 aa16.58■□□□□ 0.24
ECHDC1-203ENST00000368291 NUP62P37198 522 aaPredicted RBP16.57■□□□□ 0.24
ECHDC1-203ENST00000368291 TMEM217Q8N7C4 229 aa16.57■□□□□ 0.24
ECHDC1-203ENST00000368291 OR5AC2Q9NZP5 309 aa16.57■□□□□ 0.24
ECHDC1-203ENST00000368291 SLC45A2Q9UMX9 530 aa16.57■□□□□ 0.24
ECHDC1-203ENST00000368291 ALG5Q9Y673 324 aa16.57■□□□□ 0.24
ECHDC1-203ENST00000368291 ORM2P19652 201 aa16.56■□□□□ 0.24
ECHDC1-203ENST00000368291 SULT1A1P50225 295 aa16.56■□□□□ 0.24
ECHDC1-203ENST00000368291 PLP1P60201 277 aa16.56■□□□□ 0.24
ECHDC1-203ENST00000368291 CYCSP99999 105 aaKnown RBP16.56■□□□□ 0.24
ECHDC1-203ENST00000368291 LRRC37A5PQ49AS3 106 aa16.56■□□□□ 0.24
ECHDC1-203ENST00000368291 C1orf194Q5T5A4 169 aa16.56■□□□□ 0.24
ECHDC1-203ENST00000368291 PFDN2Q9UHV9 154 aa16.56■□□□□ 0.24
ECHDC1-203ENST00000368291 ZNF688P0C7X2 276 aa16.55■□□□□ 0.24
ECHDC1-203ENST00000368291 RPL35AP18077 110 aaKnown RBP16.55■□□□□ 0.24
ECHDC1-203ENST00000368291 SELENOTP62341 195 aa16.55■□□□□ 0.24
ECHDC1-203ENST00000368291 VWC2Q2TAL6 325 aa16.55■□□□□ 0.24
ECHDC1-203ENST00000368291 LEMD1Q68G75 181 aa16.55■□□□□ 0.24
ECHDC1-203ENST00000368291 OR1B1Q8NGR6 318 aa16.55■□□□□ 0.24
ECHDC1-203ENST00000368291 MGST2Q99735 147 aa16.55■□□□□ 0.24
ECHDC1-203ENST00000368291 NRN1Q9NPD7 142 aa16.55■□□□□ 0.24
ECHDC1-203ENST00000368291 DNAH7Q8WXX0 4024 aa16.55■□□□□ 0.24
ECHDC1-203ENST00000368291 AGPAT2O15120 278 aa16.54■□□□□ 0.24
ECHDC1-203ENST00000368291 LINC00869P0C866 280 aa16.54■□□□□ 0.24
ECHDC1-203ENST00000368291 PPP1R1CQ8WVI7 109 aa16.54■□□□□ 0.24
ECHDC1-203ENST00000368291 DOK5Q9P104 306 aa16.54■□□□□ 0.24
ECHDC1-203ENST00000368291 ZNF98A6NK75 572 aa16.53■□□□□ 0.24
ECHDC1-203ENST00000368291 PPP1R14BQ96C90 147 aa16.53■□□□□ 0.24
ECHDC1-203ENST00000368291 RNF126Q9BV68 326 aa16.53■□□□□ 0.24
ECHDC1-203ENST00000368291 FBXL17Q9UF56 701 aa16.53■□□□□ 0.24
ECHDC1-203ENST00000368291 KIR2DL5BA0A0G2JN68 375 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 KIR2DL5BA0A0G2JPC4 375 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 E5RGE8 158 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 H3BRN7 92 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 RLN2P04090 185 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 S100A11P31949 105 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 NHLH2Q02577 135 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 PATE2Q6UY27 113 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 OR8I2Q8N0Y5 310 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 KIR2DL5AQ8N109 375 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 KIR2DL5BQ8NHK3 375 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 C17orf77Q96MU5 243 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 TMEM147Q9BVK8 224 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 SLC25A32Q9H2D1 315 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 UQCC1Q9NVA1 299 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 WDR83OSQ9Y284 106 aa16.52■□□□□ 0.24
ECHDC1-203ENST00000368291 MPC2O95563 127 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 CXCL3P19876 107 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 APOC4P55056 127 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 STX12Q86Y82 276 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 OVOL2Q9BRP0 275 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 SCRT1Q9BWW7 348 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 SLC25A39Q9BZJ4 359 aaPredicted RBP16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 SOCS3O14543 225 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 EWSR1Q01844 656 aaKnown RBP eCLIP16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 ZNF546Q86UE3 836 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 SHANK2-AS3Q9BTD1 123 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 ARL6Q9H0F7 186 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 SLC25A22Q9H936 323 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 EDA2RQ9HAV5 297 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 SEPSECSQ9HD40 501 aaKnown RBP16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 HIGD1AQ9Y241 93 aa16.51■□□□□ 0.23
ECHDC1-203ENST00000368291 HYPMO75409 117 aa16.5■□□□□ 0.23
ECHDC1-203ENST00000368291 HBG1P69891 147 aa16.5■□□□□ 0.23
ECHDC1-203ENST00000368291 HBG2P69892 147 aa16.5■□□□□ 0.23
ECHDC1-203ENST00000368291 PSMG4Q5JS54 123 aa16.5■□□□□ 0.23
ECHDC1-203ENST00000368291 UHRF2Q96PU4 802 aa16.5■□□□□ 0.23
ECHDC1-203ENST00000368291 UBE2L5PA0A1B0GUS4 154 aa16.49■□□□□ 0.23
ECHDC1-203ENST00000368291 KNCNA6PVL3 124 aa16.49■□□□□ 0.23
ECHDC1-203ENST00000368291 UBE2CO00762 179 aa16.49■□□□□ 0.23
ECHDC1-203ENST00000368291 OR5G3P0C626 314 aa16.49■□□□□ 0.23
ECHDC1-203ENST00000368291 CAMLGP49069 296 aa16.49■□□□□ 0.23
ECHDC1-203ENST00000368291 RAP2BP61225 183 aa16.49■□□□□ 0.23
ECHDC1-203ENST00000368291 ATP6V1FQ16864 119 aa16.49■□□□□ 0.23
ECHDC1-203ENST00000368291 Q6ZWC4 215 aa16.49■□□□□ 0.23
ECHDC1-203ENST00000368291 SLC25A31Q9H0C2 315 aa16.49■□□□□ 0.23
ECHDC1-203ENST00000368291 TRPT1Q86TN4 253 aaKnown RBP16.48■□□□□ 0.23
ECHDC1-203ENST00000368291 OR11H7Q8NGC8 314 aa16.48■□□□□ 0.23
ECHDC1-203ENST00000368291 CSTL1Q9H114 145 aa16.48■□□□□ 0.23
ECHDC1-203ENST00000368291 ARV1Q9H2C2 271 aa16.48■□□□□ 0.23
ECHDC1-203ENST00000368291 SNRPD3P62318 126 aaKnown RBP16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 PRR20EP86478 221 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 PRR20CP86479 221 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 PRR20DP86480 221 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 PRR20BP86481 221 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 PRR20AP86496 221 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 FCN2Q15485 313 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 RGS21Q2M5E4 152 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 DEFB135Q30KP9 77 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 PXDC1Q5TGL8 231 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 MIC13Q5XKP0 118 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 OR5C1Q8NGR4 320 aa16.47■□□□□ 0.23
ECHDC1-203ENST00000368291 GALR1P47211 349 aa16.46■□□□□ 0.23
ECHDC1-203ENST00000368291 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.46■□□□□ 0.23
ECHDC1-203ENST00000368291 STHQ8IWL8 128 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms