RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 FAM78BQ5VT40 261 aa17.61■□□□□ 0.41
USF2-201ENST00000222305 NDUFA11Q86Y39 141 aa17.61■□□□□ 0.41
USF2-201ENST00000222305 DPF1Q92782 380 aa17.61■□□□□ 0.41
USF2-201ENST00000222305 ZNF320A2RRD8 509 aa17.6■□□□□ 0.41
USF2-201ENST00000222305 ZNF705EA8MWA4 302 aaPredicted RBP17.6■□□□□ 0.41
USF2-201ENST00000222305 RAB5CP51148 216 aa17.6■□□□□ 0.41
USF2-201ENST00000222305 PXDC1Q5TGL8 231 aa17.6■□□□□ 0.41
USF2-201ENST00000222305 MORN5Q5VZ52 161 aa17.6■□□□□ 0.41
USF2-201ENST00000222305 GPHB5Q86YW7 130 aa17.6■□□□□ 0.41
USF2-201ENST00000222305 GATAD1Q8WUU5 269 aa17.6■□□□□ 0.41
USF2-201ENST00000222305 CITED1Q99966 193 aa17.6■□□□□ 0.41
USF2-201ENST00000222305 MRPL27Q9P0M9 148 aaKnown RBP17.6■□□□□ 0.41
USF2-201ENST00000222305 HIGD1AQ9Y241 93 aa17.6■□□□□ 0.41
USF2-201ENST00000222305 ELOA3CA0A087WX78 387 aaPredicted RBP17.59■□□□□ 0.41
USF2-201ENST00000222305 HMGB3O15347 200 aaKnown RBP17.59■□□□□ 0.41
USF2-201ENST00000222305 CDC34P49427 236 aaPredicted RBP17.59■□□□□ 0.41
USF2-201ENST00000222305 LINC00305Q7Z4B0 112 aa17.59■□□□□ 0.41
USF2-201ENST00000222305 TMEM190Q8WZ59 177 aa17.59■□□□□ 0.41
USF2-201ENST00000222305 A0A1W2PPV4 95 aa17.58■□□□□ 0.41
USF2-201ENST00000222305 RGS13O14921 159 aa17.58■□□□□ 0.41
USF2-201ENST00000222305 ZP3P21754 424 aa17.58■□□□□ 0.41
USF2-201ENST00000222305 SYNJ2BPP57105 145 aa17.58■□□□□ 0.41
USF2-201ENST00000222305 RHOBP62745 196 aa17.58■□□□□ 0.41
USF2-201ENST00000222305 FAM106AQ4KMX7 169 aa17.58■□□□□ 0.41
USF2-201ENST00000222305 MIR17HGQ75NE6 70 aa17.58■□□□□ 0.41
USF2-201ENST00000222305 RABAC1Q9UI14 185 aa17.58■□□□□ 0.41
USF2-201ENST00000222305 CCL24O00175 119 aa17.58■□□□□ 0.4
USF2-201ENST00000222305 DPPA3Q6W0C5 159 aa17.58■□□□□ 0.4
USF2-201ENST00000222305 SLC25A39Q9BZJ4 359 aaPredicted RBP17.58■□□□□ 0.4
USF2-201ENST00000222305 ACTR3CQ9C0K3 210 aaPredicted RBP17.58■□□□□ 0.4
USF2-201ENST00000222305 FUT9Q9Y231 359 aa17.58■□□□□ 0.4
USF2-201ENST00000222305 SEC14L6B5MCN3 397 aa17.57■□□□□ 0.4
USF2-201ENST00000222305 FHL3Q13643 280 aa17.57■□□□□ 0.4
USF2-201ENST00000222305 LEMD1Q68G75 181 aa17.57■□□□□ 0.4
USF2-201ENST00000222305 RAB24Q969Q5 203 aa17.57■□□□□ 0.4
USF2-201ENST00000222305 SCRT1Q9BWW7 348 aa17.57■□□□□ 0.4
USF2-201ENST00000222305 IGHV3-49A0A0A0MS15 119 aa17.56■□□□□ 0.4
USF2-201ENST00000222305 TRAV5A0A0B4J249 113 aa17.56■□□□□ 0.4
USF2-201ENST00000222305 KLF5Q13887 457 aaPredicted RBP17.56■□□□□ 0.4
USF2-201ENST00000222305 IGHV3OR16-13A0A075B7E8 117 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 IGHV3-74A0A0B4J1X5 117 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 CTXND1A0A1B0GTU2 59 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 A0A1B0GV50 99 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 H3BRN7 92 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 EDN2P20800 178 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 TM4SF20Q53R12 229 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 LCN15Q6UWW0 184 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 C1QL4Q86Z23 238 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 METTL26Q96S19 204 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 RNF2Q99496 336 aa17.55■□□□□ 0.4
USF2-201ENST00000222305 MRPL32Q9BYC8 188 aaKnown RBP17.55■□□□□ 0.4
USF2-201ENST00000222305 APOHP02749 345 aaPredicted RBP17.54■□□□□ 0.4
USF2-201ENST00000222305 NMBP08949 121 aa17.54■□□□□ 0.4
USF2-201ENST00000222305 FGF8P55075 233 aaPredicted RBP17.54■□□□□ 0.4
USF2-201ENST00000222305 REC114Q7Z4M0 266 aa17.54■□□□□ 0.4
USF2-201ENST00000222305 DLX4Q92988 240 aaPredicted RBP17.54■□□□□ 0.4
USF2-201ENST00000222305 SHANK2-AS3Q9BTD1 123 aa17.54■□□□□ 0.4
USF2-201ENST00000222305 MAP1LC3B2A6NCE7 125 aa17.54■□□□□ 0.4
USF2-201ENST00000222305 H2AFB1P0C5Y9 115 aa17.54■□□□□ 0.4
USF2-201ENST00000222305 NPPCP23582 126 aa17.54■□□□□ 0.4
USF2-201ENST00000222305 LRRC20Q8TCA0 184 aa17.54■□□□□ 0.4
USF2-201ENST00000222305 SAT2Q96F10 170 aaPredicted RBP17.54■□□□□ 0.4
USF2-201ENST00000222305 MDFIQ99750 246 aa17.54■□□□□ 0.4
USF2-201ENST00000222305 MAP1LC3BQ9GZQ8 125 aa17.54■□□□□ 0.4
USF2-201ENST00000222305 IGHV3-66A0A0C4DH42 116 aa17.53■□□□□ 0.4
USF2-201ENST00000222305 LGALS9O00182 355 aa17.53■□□□□ 0.4
USF2-201ENST00000222305 CRYBB3P26998 211 aa17.53■□□□□ 0.4
USF2-201ENST00000222305 C12orf54Q6X4T0 127 aa17.53■□□□□ 0.4
USF2-201ENST00000222305 SFT2D1Q8WV19 159 aa17.53■□□□□ 0.4
USF2-201ENST00000222305 SLC25A2Q9BXI2 301 aa17.53■□□□□ 0.4
USF2-201ENST00000222305 DAZ1Q9NQZ3 744 aaKnown RBP17.53■□□□□ 0.4
USF2-201ENST00000222305 ZNF98A6NK75 572 aa17.52■□□□□ 0.4
USF2-201ENST00000222305 BLOC1S1P78537 153 aa17.52■□□□□ 0.4
USF2-201ENST00000222305 UFC1Q9Y3C8 167 aa17.52■□□□□ 0.4
USF2-201ENST00000222305 TMEM213A2RRL7 107 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 A8MWP6 167 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 STAG3L2P0CL84 134 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 STAG3L3P0CL85 134 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 C8orf88P0DMB2 117 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 RIPPLY3P57055 190 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 RAB14P61106 215 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 C3orf56Q8N813 242 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 MBD3L1Q8WWY6 194 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 FAM167A-AS1Q96KT0 104 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 ZNF747Q9BV97 191 aa17.51■□□□□ 0.39
USF2-201ENST00000222305 TECRQ9NZ01 308 aaKnown RBP17.51■□□□□ 0.39
USF2-201ENST00000222305 K7EMT4 169 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 ARL14EPLP0DKL9 152 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 HRH4Q9H3N8 390 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 U3KQE9 123 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 BUB3O43684 328 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 OR7C2O60412 319 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 MYCNOSP40205 109 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 TAS2R45P59539 299 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 KHDC3LQ587J8 217 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 CLLU1Q5K131 121 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 COL6A5A8TX70 2615 aa17.5■□□□□ 0.39
USF2-201ENST00000222305 IGHV7-4-1A0A0J9YVY3 117 aa17.49■□□□□ 0.39
USF2-201ENST00000222305 S100A7AQ86SG5 101 aa17.49■□□□□ 0.39
USF2-201ENST00000222305 OR9G4Q8NGQ1 327 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms