RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 MUC5ACP98088 5654 aa0.4□□□□□ -2.34
DENND4A-205ENST00000562540 NAV3Q8IVL0 2385 aa0.4□□□□□ -2.34
DENND4A-205ENST00000562540 ZGRF1Q86YA3 2104 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 KNTC1P50748 2209 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 J3QRK9 145 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 KPNA3O00505 521 aaPredicted RBP0.4□□□□□ -2.35
DENND4A-205ENST00000562540 CCL16O15467 120 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 NIPSNAP2O75323 286 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 RPP14O95059 124 aaKnown RBP0.4□□□□□ -2.35
DENND4A-205ENST00000562540 ZNF682O95780 498 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 CEBPGP53567 150 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 EIF5AP63241 154 aaKnown RBP0.4□□□□□ -2.35
DENND4A-205ENST00000562540 PSG9Q00887 426 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 Q6Q795 121 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 LCA10Q71F78 164 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 C12orf45Q8N5I9 185 aaPredicted RBP0.4□□□□□ -2.35
DENND4A-205ENST00000562540 OR2T35Q8NGX2 323 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 OR2T10Q8NGZ9 312 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 SLC25A40Q8TBP6 338 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 FAM172AQ8WUF8 416 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 ARL5BQ96KC2 179 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 TRIM4Q9C037 500 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 RNASE7Q9H1E1 156 aaKnown RBP0.4□□□□□ -2.35
DENND4A-205ENST00000562540 C14orf132Q9NPU4 83 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.4□□□□□ -2.35
DENND4A-205ENST00000562540 C14orf105Q9NVL8 296 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 TVP23BQ9NYZ1 205 aa0.4□□□□□ -2.35
DENND4A-205ENST00000562540 CYB5BO43169 146 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 DHFRP00374 187 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 SERPINE1P05121 402 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 C8GP07360 202 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 AESQ08117 197 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 EDDM3AQ14507 147 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 C12orf74Q32Q52 190 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 SPATA8Q6RVD6 105 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 ST6GALNAC3Q8NDV1 305 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 TMEM254Q8TBM7 123 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 ADAT3Q96EY9 351 aaPredicted RBP0.39□□□□□ -2.35
DENND4A-205ENST00000562540 PARD6GQ9BYG4 376 aaPredicted RBP0.39□□□□□ -2.35
DENND4A-205ENST00000562540 UBAP1Q9NZ09 502 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 NOSIPQ9Y314 301 aaKnown RBP0.39□□□□□ -2.35
DENND4A-205ENST00000562540 PRELID3BQ9Y3B1 194 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 ROBO3Q96MS0 1386 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 MUC4Q99102 2169 aa0.39□□□□□ -2.35
DENND4A-205ENST00000562540 ALPK3Q96L96 1907 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 HECW2Q9P2P5 1572 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 TCRBV4S1A1TA0A5B7 111 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 OR2T8A6NH00 312 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 PDE6DO43924 150 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 KLF7O75840 302 aaPredicted RBP0.38□□□□□ -2.35
DENND4A-205ENST00000562540 GADD45GO95257 159 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 LYPLA2O95372 231 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 RPS17P08708 135 aaKnown RBP0.38□□□□□ -2.35
DENND4A-205ENST00000562540 SRP14P37108 136 aaKnown RBP0.38□□□□□ -2.35
DENND4A-205ENST00000562540 ITGB3BPQ13352 177 aaPredicted RBP0.38□□□□□ -2.35
DENND4A-205ENST00000562540 LINC00322Q6ZN03 302 aaPredicted RBP0.38□□□□□ -2.35
DENND4A-205ENST00000562540 SLAMF6Q96DU3 332 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 GPER1Q99527 375 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 PRADC1Q9BSG0 188 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 TLNRD1Q9H1K6 362 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 HECW1Q76N89 1606 aa0.38□□□□□ -2.35
DENND4A-205ENST00000562540 MED1Q15648 1581 aaPredicted RBP0.37□□□□□ -2.35
DENND4A-205ENST00000562540 NEO1Q92859 1461 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 TRBV6-4A0A1B0GX49 114 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 NUPR1O60356 82 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 EFNA4P52798 201 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 DEFA3P59666 94 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 DYNLT1P63172 113 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 HIST1H3AP68431 136 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 H3F3AP84243 136 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 SPRNQ5BIV9 151 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 LYRM7Q5U5X0 104 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 SLC30A7Q8NEW0 376 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 TAS2R7Q9NYW3 318 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 GLTPQ9NZD2 209 aa0.37□□□□□ -2.35
DENND4A-205ENST00000562540 CHCHD2Q9Y6H1 151 aaPredicted RBP0.37□□□□□ -2.35
DENND4A-205ENST00000562540 PTPRFP10586 1907 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 PEAK1Q9H792 1746 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 IGHV1-58A0A0C4DH39 117 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 TLCD2A6NGC4 264 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 SMIM9A6NGZ8 99 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 SRSF6Q13247 344 aaKnown RBP0.36□□□□□ -2.35
DENND4A-205ENST00000562540 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 C2orf82Q6UX34 121 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 Q8IYB0 196 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 OR51A2Q8NGJ7 313 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 TP53RKQ96S44 253 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 RNF122Q9H9V4 155 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 ORMDL1Q9P0S3 153 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 FANCMQ8IYD8 2048 aa0.36□□□□□ -2.35
DENND4A-205ENST00000562540 PLXNA4Q9HCM2 1894 aa0.35□□□□□ -2.35
DENND4A-205ENST00000562540 ASH1LQ9NR48 2969 aaKnown RBP0.35□□□□□ -2.35
DENND4A-205ENST00000562540 TRGV10A0A0A0MS01 117 aa0.35□□□□□ -2.35
DENND4A-205ENST00000562540 TIMM17BO60830 172 aa0.35□□□□□ -2.35
DENND4A-205ENST00000562540 SRIP30626 198 aa0.35□□□□□ -2.35
DENND4A-205ENST00000562540 RANP62826 216 aaKnown RBP0.35□□□□□ -2.35
DENND4A-205ENST00000562540 KRR1Q13601 381 aaKnown RBP0.35□□□□□ -2.35
DENND4A-205ENST00000562540 TMEM97Q5BJF2 176 aa0.35□□□□□ -2.35
DENND4A-205ENST00000562540 OR8J2Q8NGG1 315 aa0.35□□□□□ -2.35
DENND4A-205ENST00000562540 OR52L1Q8NGH7 329 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms