RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ID1P41134 155 aa10.24□□□□□ -0.77
RTN3-214ENST00000545432 SPCS3P61009 180 aa10.24□□□□□ -0.77
RTN3-214ENST00000545432 TSPAN5P62079 268 aa10.24□□□□□ -0.77
RTN3-214ENST00000545432 FAM78BQ5VT40 261 aa10.24□□□□□ -0.77
RTN3-214ENST00000545432 OR8G2PQ6IF36 304 aa10.24□□□□□ -0.77
RTN3-214ENST00000545432 SLC24A4Q8NFF2 622 aa10.24□□□□□ -0.77
RTN3-214ENST00000545432 OR4B1Q8NGF8 309 aa10.24□□□□□ -0.77
RTN3-214ENST00000545432 PDCD10Q9BUL8 212 aa10.24□□□□□ -0.77
RTN3-214ENST00000545432 Q9H3A6 140 aa10.24□□□□□ -0.77
RTN3-214ENST00000545432 ISLRO14498 428 aa10.23□□□□□ -0.77
RTN3-214ENST00000545432 PSG1P11464 419 aa10.23□□□□□ -0.77
RTN3-214ENST00000545432 TTC32Q5I0X7 151 aa10.23□□□□□ -0.77
RTN3-214ENST00000545432 UBE2NLQ5JXB2 153 aa10.23□□□□□ -0.77
RTN3-214ENST00000545432 C1orf194Q5T5A4 169 aa10.23□□□□□ -0.77
RTN3-214ENST00000545432 LHFPL1Q86WI0 220 aa10.23□□□□□ -0.77
RTN3-214ENST00000545432 LINC00052Q96N35 136 aa10.23□□□□□ -0.77
RTN3-214ENST00000545432 C7orf50Q9BRJ6 194 aaKnown RBP10.23□□□□□ -0.77
RTN3-214ENST00000545432 UPK3BQ9BT76 320 aa10.23□□□□□ -0.77
RTN3-214ENST00000545432 ENY2Q9NPA8 101 aa10.23□□□□□ -0.77
RTN3-214ENST00000545432 CBY3A6NI87 242 aa10.22□□□□□ -0.77
RTN3-214ENST00000545432 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
RTN3-214ENST00000545432 UCP1P25874 307 aa10.22□□□□□ -0.77
RTN3-214ENST00000545432 AKR1C2P52895 323 aa10.22□□□□□ -0.77
RTN3-214ENST00000545432 TMEM69Q5SWH9 247 aa10.22□□□□□ -0.77
RTN3-214ENST00000545432 ETFRF1Q6IPR1 90 aa10.22□□□□□ -0.77
RTN3-214ENST00000545432 SSX7Q7RTT5 188 aa10.22□□□□□ -0.77
RTN3-214ENST00000545432 RNF141Q8WVD5 230 aa10.22□□□□□ -0.77
RTN3-214ENST00000545432 NPIPB3Q92617 1050 aa10.22□□□□□ -0.77
RTN3-214ENST00000545432 MAGT1Q9H0U3 335 aa10.22□□□□□ -0.77
RTN3-214ENST00000545432 C3orf85A0A1B0GTC6 90 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 F6UB75 175 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 NUDT3O95989 172 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 ATP5G1P05496 136 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 ATP5G3P48201 142 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 B2MP61769 119 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 EBLN2Q6P2I7 272 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 CROCCP3Q8IVE0 287 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 FAM219AQ8IW50 185 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 OR51G1Q8NGK1 321 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 GPR146Q96CH1 333 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 RNF125Q96EQ8 232 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 ZNF503Q96F45 646 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 CNBD2Q96M20 576 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 C17orf77Q96MU5 243 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 PGPEP1Q9NXJ5 209 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 PFDN2Q9UHV9 154 aa10.21□□□□□ -0.77
RTN3-214ENST00000545432 F5H768 121 aa10.2□□□□□ -0.78
RTN3-214ENST00000545432 ELK1P19419 428 aa10.2□□□□□ -0.78
RTN3-214ENST00000545432 PIGPP57054 158 aa10.2□□□□□ -0.78
RTN3-214ENST00000545432 SUPT4H1P63272 117 aaKnown RBP10.2□□□□□ -0.78
RTN3-214ENST00000545432 SAMD13Q5VXD3 122 aa10.2□□□□□ -0.78
RTN3-214ENST00000545432 Q6ZRN7 208 aaPredicted RBP10.2□□□□□ -0.78
RTN3-214ENST00000545432 ABHD1Q96SE0 405 aa10.2□□□□□ -0.78
RTN3-214ENST00000545432 VCX3BQ9H321 246 aa10.2□□□□□ -0.78
RTN3-214ENST00000545432 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.2□□□□□ -0.78
RTN3-214ENST00000545432 DOK5Q9P104 306 aa10.2□□□□□ -0.78
RTN3-214ENST00000545432 ZNF705GA8MUZ8 300 aaPredicted RBP10.19□□□□□ -0.78
RTN3-214ENST00000545432 M0QYG6 137 aa10.19□□□□□ -0.78
RTN3-214ENST00000545432 B3GALNT1O75752 331 aa10.19□□□□□ -0.78
RTN3-214ENST00000545432 CDS2O95674 445 aa10.19□□□□□ -0.78
RTN3-214ENST00000545432 PRM2P04554 102 aa10.19□□□□□ -0.78
RTN3-214ENST00000545432 DEFB130BP0DP73 79 aa10.19□□□□□ -0.78
RTN3-214ENST00000545432 DEFB130AP0DP74 79 aa10.19□□□□□ -0.78
RTN3-214ENST00000545432 RRNAD1Q96FB5 475 aaKnown RBP10.19□□□□□ -0.78
RTN3-214ENST00000545432 IGKV1D-37A0A075B6S9 117 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 PI3P19957 117 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 AZU1P20160 251 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 RCVRNP35243 200 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 SP6Q3SY56 376 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 NMSQ5H8A3 153 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 Q5VSD8 79 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 SAMD12Q8N8I0 201 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 COQ8AQ8NI60 647 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 C20orf173Q96LM9 149 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 HEYLQ9NQ87 328 aaPredicted RBP10.18□□□□□ -0.78
RTN3-214ENST00000545432 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 UBR4Q5T4S7 5183 aa10.18□□□□□ -0.78
RTN3-214ENST00000545432 LOC100506127A0A0U1RQW1 187 aa10.17□□□□□ -0.78
RTN3-214ENST00000545432 CDPF1Q6NVV7 123 aa10.17□□□□□ -0.78
RTN3-214ENST00000545432 NOXA1Q86UR1 476 aa10.17□□□□□ -0.78
RTN3-214ENST00000545432 OR11H7Q8NGC8 314 aa10.17□□□□□ -0.78
RTN3-214ENST00000545432 ACY3Q96HD9 319 aa10.17□□□□□ -0.78
RTN3-214ENST00000545432 RAB26Q9ULW5 256 aa10.17□□□□□ -0.78
RTN3-214ENST00000545432 PGAM2P15259 253 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 RPS19P39019 145 aaKnown RBP10.16□□□□□ -0.78
RTN3-214ENST00000545432 MEOX2P50222 304 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 CLINT1Q14677 625 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 FCN2Q15485 313 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 TRIM16LQ309B1 348 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 IZUMO2Q6UXV1 221 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 ARRDC1Q8N5I2 433 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 LINC00612Q8N6U2 182 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 OR4C16Q8NGL9 310 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 GLYATL2Q8WU03 294 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 TMEM208Q9BTX3 173 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 TMEM222Q9H0R3 208 aa10.16□□□□□ -0.78
RTN3-214ENST00000545432 ANKRD65E5RJM6 399 aa10.15□□□□□ -0.78
RTN3-214ENST00000545432 H3BNG1 76 aa10.15□□□□□ -0.78
RTN3-214ENST00000545432 KLF9Q13886 244 aaPredicted RBP10.15□□□□□ -0.78
RTN3-214ENST00000545432 ESRGQ1W209 222 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms