RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ASAH2BP0C7U1 165 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 FKBP2P26885 142 aaKnown RBP0.71□□□□□ -2.3
SKP1-203ENST00000517625 RAB4BP61018 213 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 YPEL3P61236 119 aaPredicted RBP0.71□□□□□ -2.3
SKP1-203ENST00000517625 HIST1H3AP68431 136 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 H3F3AP84243 136 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 EDDM3AQ14507 147 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 KHDC3LQ587J8 217 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 CLVS1Q8IUQ0 354 aaPredicted RBP0.71□□□□□ -2.3
SKP1-203ENST00000517625 TRAPPC5Q8IUR0 188 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 LINC00311Q8N616 119 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 SIGLECL1Q8N7X8 197 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 C4orf3Q8WVX3 66 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 CMSS1Q9BQ75 279 aaKnown RBP0.71□□□□□ -2.3
SKP1-203ENST00000517625 CCDC90BQ9GZT6 254 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 RNF122Q9H9V4 155 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 TP73-AS1Q9UF72 201 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 HS3ST2Q9Y278 367 aa0.71□□□□□ -2.3
SKP1-203ENST00000517625 WRNQ14191 1432 aaPredicted RBP eCLIP0.71□□□□□ -2.33e-11■■■□□ 19.1
SKP1-203ENST00000517625 WDR87Q6ZQQ6 2873 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 PLB1Q6P1J6 1458 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 NEO1Q92859 1461 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 IGKV1D-42A0A075B6H8 117 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 C7orf71A4D174 169 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 BUB1B-PAK6H3BSN5 160 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 M0R2N4 97 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 UBL3O95164 117 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 SPI1P17947 270 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 S100A4P26447 101 aaKnown RBP0.7□□□□□ -2.3
SKP1-203ENST00000517625 AP3S2P59780 193 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 RHOGP84095 191 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 OR8J2Q8NGG1 315 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 CT55Q8WUE5 264 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 DNAJC9Q8WXX5 260 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 ITFG2Q969R8 447 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 C8orf76Q96K31 380 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 CCDC42Q96M95 316 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 KLK9Q9UKQ9 250 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 EPDR1Q9UM22 224 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 CYSLTR1Q9Y271 337 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 XIRP2A4UGR9 3374 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 HIVEP1P15822 2718 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 PCF11O94913 1555 aaKnown RBP0.7□□□□□ -2.3
SKP1-203ENST00000517625 GREB1Q4ZG55 1949 aa0.7□□□□□ -2.3
SKP1-203ENST00000517625 LRBAP50851 2863 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 BRWD1Q9NSI6 2320 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 C2orf70A6NJV1 201 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 OR2J2O76002 312 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 PROSCO94903 275 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 CRYGAP11844 174 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 RPS20P60866 119 aaKnown RBP0.69□□□□□ -2.3
SKP1-203ENST00000517625 CDC42P60953 191 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 OOSP2Q86WS3 158 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 KRT222Q8N1A0 295 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 C12orf45Q8N5I9 185 aaPredicted RBP0.69□□□□□ -2.3
SKP1-203ENST00000517625 ZNF418Q8TF45 676 aaPredicted RBP0.69□□□□□ -2.3
SKP1-203ENST00000517625 TMEM147Q9BVK8 224 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 TRIM4Q9C037 500 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 OSTCQ9NRP0 149 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.69□□□□□ -2.3
SKP1-203ENST00000517625 PKIGQ9Y2B9 76 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 NCOA1Q15788 1441 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 WDFY3Q8IZQ1 3526 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 MYO15AQ9UKN7 3530 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 CSMD2Q7Z408 3487 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 FREM1Q5H8C1 2179 aa0.69□□□□□ -2.3
SKP1-203ENST00000517625 PTPRZ1P23471 2315 aaPredicted RBP0.69□□□□□ -2.3
SKP1-203ENST00000517625 SPTA1P02549 2419 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 NESP48681 1621 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 A0A087WUJ7 227 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 TRBV6-7A0A0A0MS04 114 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 TRAV12-1A0A0B4J245 112 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 PPIBP23284 216 aaKnown RBP0.68□□□□□ -2.3
SKP1-203ENST00000517625 CASP1P29466 404 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 GDPD1Q8N9F7 314 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 OR13D1Q8NGV5 346 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 OR10J5Q8NHC4 309 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 SFT2D1Q8WV19 159 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 BAZ2BQ9UIF8 2168 aaKnown RBP0.68□□□□□ -2.3
SKP1-203ENST00000517625 SLC35A3Q9Y2D2 325 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 C22orf24Q9Y442 160 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 VPS13AQ96RL7 3174 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 MYH11P35749 1972 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 STRCQ7RTU9 1775 aa0.68□□□□□ -2.3
SKP1-203ENST00000517625 SVEP1Q4LDE5 3571 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 COL6A6A6NMZ7 2263 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 ADGRB2O60241 1585 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 CACNA1HO95180 2353 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 KIF13AQ9H1H9 1805 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 IGKV1-9A0A0C4DH69 117 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 CLDN25C9JDP6 229 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 INE1O15225 51 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 CNIH1O95406 144 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 ZNF682O95780 498 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 SERPINE1P05121 402 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 OR4E1P0C645 316 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 C12orf74Q32Q52 190 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 LINC01554Q52M75 96 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 AKIRIN2Q53H80 203 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 TMEM97Q5BJF2 176 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms