RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ZNF773Q6PK81 442 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 EPGNQ6UW88 154 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 TCF23Q7RTU1 214 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 TRAPPC6BQ86SZ2 158 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 UBL4BQ8N7F7 174 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 DYNC2LI1Q8TCX1 351 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 HAVCR2Q8TDQ0 301 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 RNF133Q8WVZ7 376 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 C1orf54Q8WWF1 131 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 FAM19A4Q96LR4 140 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 SPACA5Q96QH8 159 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 CAMK2N2Q96S95 79 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 RTL8AQ9BWD3 113 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 CACYBPQ9HB71 228 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 TMEM27Q9HBJ8 222 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 C12orf4Q9NQ89 552 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 RRAGDQ9NQL2 400 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 DIABLOQ9NR28 239 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 PLEKHJ1Q9NW61 149 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF586Q9NXT0 402 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 RAB22AQ9UL26 194 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 TIMM22Q9Y584 194 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 USH2AO75445 5202 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 IGLV4-60A0A075B6I1 120 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 TRAV3A0A0B4J244 114 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 A0A0J9YXV3 536 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 LRCOL1A6NCL2 159 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 C2orf70A6NJV1 201 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 RFPL4AA6NLU0 287 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 LRRN3E7EW58 273 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 RFPL4AL1F8VTS6 287 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 TAAR5O14804 337 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 HPGDSO60760 199 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 ATP5HO75947 161 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 GABARAPO95166 117 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 BCHEP06276 602 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 MRPL3P09001 348 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 CD3GP09693 182 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 LIMS3P0CW19 117 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 LIMS4P0CW20 117 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 PSKH1P11801 424 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 HTN3P15516 51 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 PSMB9P28065 219 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 HLA-DMAP28067 261 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 BLVRBP30043 206 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 TAS2R31P59538 309 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 MYL5Q02045 173 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 RGNQ15493 299 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 CEACAM21Q3KPI0 293 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 COX19Q49B96 90 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 OR10J3Q5JRS4 329 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 SPIN3Q5JUX0 258 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 TMEM69Q5SWH9 247 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 OGFRL1Q5TC84 451 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 TNFAIP8L2Q6P589 184 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 ANGPTL5Q86XS5 388 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 RBPMSQ93062 196 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 Q96MT0 163 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 LINC01600Q96MT4 127 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 RBP7Q96R05 134 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 C20orf144Q9BQM9 153 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 RHOFQ9HBH0 211 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 ZNF286AQ9HBT8 521 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 EXOSC4Q9NPD3 245 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 RASL12Q9NYN1 266 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 TAS2R5Q9NYW4 299 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 DNAJC27Q9NZQ0 273 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 COMMD9Q9P000 198 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 VAX2Q9UIW0 290 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 ANXA10Q9UJ72 324 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 LINC00588Q9Y4M8 146 aa2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-208ENST00000511439 DNAH8Q96JB1 4490 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 IGHV3-72A0A0B4J1Y9 119 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 A0A1B0GWA3 101 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 J3QT63 122 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 BET1O15155 118 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 PSPHP1O15172 72 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 RER1O15258 196 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 ATP8B1O43520 1251 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 OR5F1O95221 314 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 HLA-DRB1P01911 266 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 SPART-AS1P0CW21 52 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 CTLA4P16410 223 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 PVALBP20472 110 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 DTYMKP23919 212 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 CDK2P24941 298 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 TALDO1P37837 337 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 PSMB2P49721 201 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 OR10A3P58181 314 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 TAS2R46P59540 309 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 HBA1P69905 142 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 IFITM3Q01628 133 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 BAXQ07812 192 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 TMEM267Q0VDI3 215 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 EDDM3AQ14507 147 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 KLHL12Q53G59 568 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 ACTBL2Q562R1 376 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 PDZD11Q5EBL8 140 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms