RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TLN1Q9Y490 2541 aaKnown RBP18.23■□□□□ 0.51
MCF2L-201ENST00000261963 SPACA3Q8IXA5 215 aa18.22■□□□□ 0.51
MCF2L-201ENST00000261963 ZNF596Q8TC21 504 aa18.22■□□□□ 0.51
MCF2L-201ENST00000261963 NABP2Q9BQ15 211 aa18.22■□□□□ 0.51
MCF2L-201ENST00000261963 COL25A1Q9BXS0 654 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-201ENST00000261963 NDUFA4L2Q9NRX3 87 aa18.22■□□□□ 0.51
MCF2L-201ENST00000261963 TECRQ9NZ01 308 aaKnown RBP18.22■□□□□ 0.51
MCF2L-201ENST00000261963 C2orf70A6NJV1 201 aa18.22■□□□□ 0.51
MCF2L-201ENST00000261963 SHISA9B4DS77 424 aa18.22■□□□□ 0.51
MCF2L-201ENST00000261963 GATA2P23769 480 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-201ENST00000261963 ATP5IP56385 69 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-201ENST00000261963 E7EUB6 86 aa18.21■□□□□ 0.51
MCF2L-201ENST00000261963 TOX4O94842 621 aa18.21■□□□□ 0.51
MCF2L-201ENST00000261963 RASL11AQ6T310 242 aa18.21■□□□□ 0.51
MCF2L-201ENST00000261963 WIPF2Q8TF74 440 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-201ENST00000261963 WASHC3Q9Y3C0 194 aa18.21■□□□□ 0.51
MCF2L-201ENST00000261963 NDUFB3O43676 98 aa18.21■□□□□ 0.51
MCF2L-201ENST00000261963 KLF5Q13887 457 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-201ENST00000261963 RNASEKQ6P5S7 137 aaKnown RBP18.21■□□□□ 0.51
MCF2L-201ENST00000261963 E7EQL1 145 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 IGLV2-8P01709 118 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 LOXP28300 417 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-201ENST00000261963 RPL8P62917 257 aaKnown RBP18.2■□□□□ 0.5
MCF2L-201ENST00000261963 SSX8Q7RTT4 187 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 OR9G1Q8NH87 305 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 ST6GALNAC6Q969X2 333 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 TNFRSF19Q9NS68 423 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 DLX6P56179 175 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 CD69Q07108 199 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 OR10X1Q8NGY0 326 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 FLYWCH2Q96CP2 140 aaKnown RBP18.2■□□□□ 0.5
MCF2L-201ENST00000261963 ZNF503Q96F45 646 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 ST20Q9HBF5 79 aa18.2■□□□□ 0.5
MCF2L-201ENST00000261963 OR2T8A6NH00 312 aa18.19■□□□□ 0.5
MCF2L-201ENST00000261963 CA1P00915 261 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-201ENST00000261963 LINC00311Q8N616 119 aa18.19■□□□□ 0.5
MCF2L-201ENST00000261963 TMEM70Q9BUB7 260 aa18.19■□□□□ 0.5
MCF2L-201ENST00000261963 COMMD5Q9GZQ3 224 aa18.19■□□□□ 0.5
MCF2L-201ENST00000261963 ARFGEF3Q5TH69 2177 aa18.19■□□□□ 0.5
MCF2L-201ENST00000261963 NUDT3O95989 172 aa18.19■□□□□ 0.5
MCF2L-201ENST00000261963 PPOXP50336 477 aa18.19■□□□□ 0.5
MCF2L-201ENST00000261963 DEFB125Q8N687 156 aa18.19■□□□□ 0.5
MCF2L-201ENST00000261963 BVES-AS1Q5T3Y7 98 aa18.18■□□□□ 0.5
MCF2L-201ENST00000261963 AMMECR1LQ6DCA0 310 aa18.18■□□□□ 0.5
MCF2L-201ENST00000261963 PRR27Q6MZM9 219 aa18.18■□□□□ 0.5
MCF2L-201ENST00000261963 SPATA12Q7Z6I5 190 aa18.18■□□□□ 0.5
MCF2L-201ENST00000261963 C8orf31Q8N9H6 132 aa18.18■□□□□ 0.5
MCF2L-201ENST00000261963 TMEM167AQ8TBQ9 72 aa18.18■□□□□ 0.5
MCF2L-201ENST00000261963 CGB1A6NKQ9 187 aa18.18■□□□□ 0.5
MCF2L-201ENST00000261963 FAM71F2Q6NXP2 309 aa18.18■□□□□ 0.5
MCF2L-201ENST00000261963 IGF2BP2-AS1Q96M15 143 aa18.18■□□□□ 0.5
MCF2L-201ENST00000261963 OR4C46A6NHA9 309 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 INS-IGF2F8WCM5 200 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 K7ERU9 68 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 IGLV2-23P01705 113 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 KIR3DL3Q8N743 410 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 OR4C13Q8NGP0 309 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 DYNLRB1Q9NP97 96 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 TP73-AS1Q9UF72 201 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 POLEQ07864 2286 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 VSTM5A8MXK1 200 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 CA7P43166 264 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 MFAP2P55001 183 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 C10orf55Q5SWW7 151 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 ASCL5Q7RTU5 278 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 PDPNQ86YL7 162 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 OR2T6Q8NHC8 308 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 FAM168AQ92567 244 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 TMEM186Q96B77 213 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 SSBP3Q9BWW4 388 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-201ENST00000261963 KAAG1Q9UBP8 84 aa18.17■□□□□ 0.5
MCF2L-201ENST00000261963 DLL1O00548 723 aa18.16■□□□□ 0.5
MCF2L-201ENST00000261963 FOXC1Q12948 553 aa18.16■□□□□ 0.5
MCF2L-201ENST00000261963 TMEM155Q4W5P6 130 aa18.16■□□□□ 0.5
MCF2L-201ENST00000261963 GGTLC3B5MD39 225 aa18.15■□□□□ 0.5
MCF2L-201ENST00000261963 WT1-ASQ06250 92 aa18.15■□□□□ 0.5
MCF2L-201ENST00000261963 C12orf54Q6X4T0 127 aa18.15■□□□□ 0.5
MCF2L-201ENST00000261963 NAV3Q8IVL0 2385 aa18.15■□□□□ 0.5
MCF2L-201ENST00000261963 S100A7P31151 101 aa18.15■□□□□ 0.5
MCF2L-201ENST00000261963 ZNF137PP52743 207 aa18.15■□□□□ 0.5
MCF2L-201ENST00000261963 ERHP84090 104 aaKnown RBP18.15■□□□□ 0.5
MCF2L-201ENST00000261963 CACNG8Q8WXS5 425 aa18.15■□□□□ 0.5
MCF2L-201ENST00000261963 CLEC5AQ9NY25 188 aa18.15■□□□□ 0.5
MCF2L-201ENST00000261963 MUC21A0A0G2JKD1 596 aa18.14■□□□□ 0.5
MCF2L-201ENST00000261963 MUC21A0A140T8X8 626 aa18.14■□□□□ 0.5
MCF2L-201ENST00000261963 OR7C2O60412 319 aa18.14■□□□□ 0.5
MCF2L-201ENST00000261963 MUC21Q5SSG8 566 aa18.14■□□□□ 0.5
MCF2L-201ENST00000261963 GDF5OSQ5U4N7 250 aa18.14■□□□□ 0.5
MCF2L-201ENST00000261963 SLC25A34Q6PIV7 304 aa18.14■□□□□ 0.5
MCF2L-201ENST00000261963 OR4A5Q8NH83 315 aa18.14■□□□□ 0.5
MCF2L-201ENST00000261963 ZNF430Q9H8G1 570 aaPredicted RBP18.14■□□□□ 0.5
MCF2L-201ENST00000261963 NGBQ9NPG2 151 aa18.14■□□□□ 0.5
MCF2L-201ENST00000261963 PTPRQQ9UMZ3 2332 aa18.14■□□□□ 0.5
MCF2L-201ENST00000261963 PSMB11A5LHX3 300 aa18.13■□□□□ 0.49
MCF2L-201ENST00000261963 K7ENP7 123 aa18.13■□□□□ 0.49
MCF2L-201ENST00000261963 SSBP2P81877 361 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-201ENST00000261963 NHLRC2Q8NBF2 726 aa18.13■□□□□ 0.49
MCF2L-201ENST00000261963 VSTM2AQ8TAG5 236 aa18.13■□□□□ 0.49
MCF2L-201ENST00000261963 SMIM12Q96EX1 92 aa18.13■□□□□ 0.49
MCF2L-201ENST00000261963 NUDT11Q96G61 164 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms