RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 C2orf70A6NJV1 201 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 A8MT66 165 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 COX6A1P12074 109 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 SERPINB9P50453 376 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 PRB3Q04118 309 aaPredicted RBP0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 LCA10Q71F78 164 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 OOSP2Q86WS3 158 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 HIST3H2BBQ8N257 126 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 WFDC11Q8NEX6 87 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 SLC25A40Q8TBP6 338 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 SIGMAR1Q99720 223 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 CMSS1Q9BQ75 279 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 TRIM4Q9C037 500 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 MYH2Q9UKX2 1941 aa0.99□□□□□ -2.25
SMCHD1-204ENST00000581226 RIC1Q4ADV7 1423 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 MYH3P11055 1940 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 C19orf84I3L1E1 186 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 OR7C1O76099 320 aaPredicted RBP0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 C8GP07360 202 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 SMIM17P0DL12 118 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 MIFP14174 115 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 HSD11B1P28845 292 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 RNASE4P34096 147 aaKnown RBP0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 Q6Q795 121 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 AAED1Q7RTV5 226 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 AQP3Q92482 292 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 SLC50A1Q9BRV3 221 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 RNF122Q9H9V4 155 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 SLC39A9Q9NUM3 307 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 UBR2Q8IWV8 1755 aa0.98□□□□□ -2.25
SMCHD1-204ENST00000581226 TAF1LQ8IZX4 1826 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 IGKV2D-26A0A0A0MRZ7 120 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 TRAV4A0A0B4J268 109 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 SSR2P43308 183 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 REEP5Q00765 189 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 PDE6HQ13956 83 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 RHEBQ15382 184 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 KHDC3LQ587J8 217 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 KRT222Q8N1A0 295 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 C3orf56Q8N813 242 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 OR4D11Q8NGI4 311 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 CCDC90BQ9GZT6 254 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 PARVBQ9HBI1 364 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 NUP210LQ5VU65 1888 aa0.97□□□□□ -2.25
SMCHD1-204ENST00000581226 A0A0D9SG52 128 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 CLDN25C9JDP6 229 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 LYZL6O75951 148 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 OR5F1O95221 314 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 OR4E1P0C645 316 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 PPIBP23284 216 aaKnown RBP0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 TEX36Q5VZQ5 186 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 OR4E2Q8NGC2 313 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 OR11H6Q8NGC7 330 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 OR13D1Q8NGV5 346 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 OR10X1Q8NGY0 326 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 C2orf50Q96LR7 162 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 GINS4Q9BRT9 223 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 OSTCQ9NRP0 149 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 RIMBP3CA6NJZ7 1639 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 RIMBP3BA6NNM3 1639 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 RIMBP3Q9UFD9 1639 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 CASP8AP2Q9UKL3 1982 aa0.96□□□□□ -2.26
SMCHD1-204ENST00000581226 HEATR1Q9H583 2144 aaKnown RBP0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 TCL1BO95988 128 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 C1QBP02746 253 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 DEFB113Q30KQ7 82 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 RNASE10Q5GAN6 216 aaKnown RBP0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 LINC00311Q8N616 119 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 STAG3L4Q8TBR4 150 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 MIXL1Q9H2W2 232 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 TVP23BQ9NYZ1 205 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 RTL1A6NKG5 1358 aa0.95□□□□□ -2.26
SMCHD1-204ENST00000581226 KIAA1549Q9HCM3 1950 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 TRAV3A0A0B4J244 114 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 C1orf196B1AJZ1 125 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 SERPINA1P01009 418 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 CASP1P29466 404 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 ATP5G3P48201 142 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 MRPS15P82914 257 aaKnown RBP0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 TAF1AQ15573 450 aaPredicted RBP0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 LIN52Q52LA3 116 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 DPPA3Q6W0C5 159 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 Q8IYB0 196 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 GPR146Q96CH1 333 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 CHMP6Q96FZ7 201 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 TAS2R4Q9NYW5 299 aa0.94□□□□□ -2.26
SMCHD1-204ENST00000581226 A0A087X0T9 212 aa0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 TRAV14DV4A0A0A6YYC5 116 aa0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 OR1I1O60431 355 aa0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 ATP5HO75947 161 aa0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 OR2B3O76000 313 aa0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 CNBPP62633 177 aaKnown RBP0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 TSNQ15631 228 aaKnown RBP0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 TRAPPC6BQ86SZ2 158 aa0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 OR8D4Q8NGM9 314 aa0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 OR10J5Q8NHC4 309 aa0.93□□□□□ -2.26
SMCHD1-204ENST00000581226 ODF3Q96PU9 254 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms