RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 FAAP20Q6NZ36 180 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 ZNF66Q6ZN08 573 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 TCF24Q7RTU0 167 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 AKAP14Q86UN6 197 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 LHFPL1Q86WI0 220 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 OR4C16Q8NGL9 310 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 DEDD2Q8WXF8 326 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 MS4A6AQ9H2W1 248 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 HRASLSQ9HDD0 168 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 NDUFA4L2Q9NRX3 87 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 TMEM140Q9NV12 185 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 COPZ2Q9P299 210 aa7.39□□□□□ -1.23
SF3B3-204ENST00000563739 A0A0B4J293 547 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 KNCNA6PVL3 124 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 INMT-MINDY4F8WBC2 141 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 GPR31O00270 319 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 HRASP01112 189 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 TCRBP04435 133 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 AKAIN1P0CW23 69 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 OR13C7P0DN81 318 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 CATR1Q13166 79 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 SPAG16Q8N0X2 631 aa7.38□□□□□ -1.23
SF3B3-204ENST00000563739 TRAV2A0A0B4J234 112 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 C16orf90A8MZG2 172 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 DISC1C4P0D8 188 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 K7EQG2 157 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 DFFBO76075 338 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 IGHV3-48P01763 117 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 RLN1P04808 185 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 UCP3P55916 312 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 TAS2R31P59538 309 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 SCGB2B2Q4G0G5 96 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 PHLDA2Q53GA4 152 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 SLC25A24Q6NUK1 477 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 MORN3Q6PF18 240 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-204ENST00000563739 CMTM1Q8IZ96 169 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 OR51H1Q8NH63 302 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 MRGPRFQ96AM1 343 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 NDUFAF3Q9BU61 184 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 ALG5Q9Y673 324 aa7.37□□□□□ -1.23
SF3B3-204ENST00000563739 IGHV3-66A0A0C4DH42 116 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 A0A1B0GU03 582 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 PGLYRP1O75594 196 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-204ENST00000563739 CCNKO75909 580 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 H2AFB2P0C5Z0 115 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 PGAM2P15259 253 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 CCR6P51684 374 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 LPCAT3Q6P1A2 487 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 TOMM20LQ6UXN7 152 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 UBAC2Q8NBM4 344 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 OR13C8Q8NGS7 320 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 TERB2Q8NHR7 220 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 DCANP1Q8TF63 244 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 ZNF486Q96H40 463 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-204ENST00000563739 PRRT1Q99946 306 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 THYN1Q9P016 225 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 NSG2Q9Y328 171 aa7.36□□□□□ -1.23
SF3B3-204ENST00000563739 DNAH8Q96JB1 4490 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 TRAV6A0A075B6T7 132 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 C7orf66A4D0T2 115 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 SPP1P10451 314 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 NQO2P16083 231 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 PI3P19957 117 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 S100GP29377 79 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 FAUP35544 74 aaKnown RBP7.35□□□□□ -1.23
SF3B3-204ENST00000563739 EIF2B2P49770 351 aaKnown RBP7.35□□□□□ -1.23
SF3B3-204ENST00000563739 CMC4P56277 68 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-204ENST00000563739 RND3P61587 244 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 SURF2Q15527 256 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-204ENST00000563739 Q56UQ5 140 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 THOC7Q6I9Y2 204 aaKnown RBP7.35□□□□□ -1.23
SF3B3-204ENST00000563739 TBC1D26Q86UD7 250 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 OR51S1Q8NGJ8 323 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 LSM10Q969L4 123 aaKnown RBP7.35□□□□□ -1.23
SF3B3-204ENST00000563739 ST6GAL2Q96JF0 529 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 COMMD5Q9GZQ3 224 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 SCRT2Q9NQ03 307 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 NUDT15Q9NV35 164 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 MCUBQ9NWR8 336 aa7.35□□□□□ -1.23
SF3B3-204ENST00000563739 MRPL36Q9P0J6 103 aaKnown RBP7.35□□□□□ -1.23
SF3B3-204ENST00000563739 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-204ENST00000563739 TRAV14DV4A0A0A6YYC5 116 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 HPRT1P00492 218 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 F2RP25116 425 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 PIGPP57054 158 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 RRAS2P62070 204 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-204ENST00000563739 C1orf134Q5TEV5 83 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 STHQ8IWL8 128 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 CCDC71LQ8N9Z2 235 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 OR1L8Q8NGR8 309 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 ZFAND1Q8TCF1 268 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 MARCH1Q8TCQ1 289 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 C20orf85Q9H1P6 137 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 PLEKHA2Q9HB19 425 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 COMMD9Q9P000 198 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 SCP2D1Q9UJQ7 156 aa7.34□□□□□ -1.23
SF3B3-204ENST00000563739 SRRM2Q9UQ35 2752 aaKnown RBP7.33□□□□□ -1.24
SF3B3-204ENST00000563739 MARCH11A6NNE9 402 aa7.33□□□□□ -1.24
SF3B3-204ENST00000563739 ST8SIA3O43173 380 aa7.33□□□□□ -1.24
SF3B3-204ENST00000563739 PRAF2O60831 178 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms